jgi.p|Nanoce1779_2|586040, gene_3988 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|586040
Unique Namegene_3988
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:563774..568410 -

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Properties
Property NameValue
TranscriptId586126
ProteinId586040
Product nameCytochrome P450
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:563774..568410 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0010181FMN binding
GO:0016491oxidoreductase activity
GO:0004497monooxygenase activity
GO:0005506iron ion binding
GO:0020037heme binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02260NO10G02260Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586040mRNA_3988-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|586040mRNA_3988Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|586040

>mRNA_3988-protein ID=mRNA_3988-protein|Name=jgi.p|Nanoce1779_2|586040|organism=Nannochloropsis oceanica|type=polypeptide|length=1233bp
MESAYETPCPVSGLVCPTTGPTSAVIRTLVVYREKPASSTKPTGARGTSS
SLAAVTLPLGASTTLDSVYEGVQRGFIPMLDTSQSFCICSTATGLPLKLR
DIHAGCDLIAYVEDGRASPHLGQPPESLPIPAGPRHKLLGKNFADLRPLI
CSAHLRLMHQYGPIFRITMPPNTEAVVICDPDLAGQVIEKPEVWPKTHFK
HNKMVRTWVNRGLFTADDDEEIWGIAHRILLPAFSNQGMKQYFNVVQQCI
ERLFVNWDGMAERNQPVDLTKCTEMFTFDVIGRVGFGHDFKAQETGTHPY
LEQLQKASNYSDARWGRGFLRTVLTQAKSLREWSALNQPNVKFVDTIVAE
RQAELEKGIRTDEKDVLTLMLTAADPQTGQRLPPDNVRDQILTFLLAGHD
STSTAITCLFMLLSQHGDVERKVMEEVERVVGNGPLTFEKLGQLQYCTCV
INESLRLFPPAQASRKDAAVDTMLGPYKIPKGMAAIVSLWGLSHNPVHWP
DPWKFDPDRWLPERAKNRSPFASLPFSAGHRGCLGRQLSIMEQRSVLART
VQRYHLRLHSLSKPSFTTPLFLKPHGVFISLELRQVSYLSTRLGPSLSDA
SLARSIPVAAAATVAGAGAPVASGAGKGVMVDATAIPPDTRLLVLYGSNM
GTCETFAGELAQHAVKIGMATISMSLDAFLEKKEMTKGAAAVIIISSTYN
GTPPDNASRFMKFLEEPVEVAKVFAGVHFSVFGCGNTQWTRTYQAVPRAI
DKALVAAQGKRLTADFACGNADSALDEEYETWKFALWEGLSKSLGISGAQ
VQPVSGAAGLVPAYVVTLLPGKRKEHQVEKAREFGDVASKWAMKNGLFIG
KVLENRELQGTASDRSTRHIEIQLAPEQHYTAGDHLAVQGGNPAEVVARA
AAVLEMKLDDMLHVHKASPQVATSSTIPFGVDLTVELILTWCVELQHTVP
RAQLAILIDRATCPPEKKALEAMMGAYDTEVNQKKRTLIELLDAYRSTKL
TLAELCTLLPPLRPRYYSISSSPLIDAEKASVTVGVVKGYTPTGRLHLGV
VSNYLAGLKAGQQVRVFVKDTKSNFRLPPTGTTPIILIGPGTGVAPLRGF
LYDREASKATGPAVLFFGCRQDDDFIYREEMEGFKARGVLQELEVAFSRK
VPGQRVYVQQLLERKARMLFQMLEAGGHVYVCGDAKHMAPDVRAAIAKIL
AEGKGLPLTHGPCLVEELVTEKRYLEDVWASG*
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Synonyms
Publications