jgi.p|Nanoce1779_2|581876, gene_3356 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|581876
Unique Namegene_3356
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:113521..115242 +

Link to JBrowse

Properties
Property NameValue
TranscriptId581962
ProteinId581876
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:113521..115242 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00330NO08G00330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581876mRNA_3356-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|581876mRNA_3356Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|581876

>mRNA_3356-protein ID=mRNA_3356-protein|Name=jgi.p|Nanoce1779_2|581876|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MLSSAQDGSDEYSLLEKNDVIGSSTFCISGSSFYHTNSESLQHTPDLCAP
VEASPLPAAVRLRNCLHSSLQNRYFWANLVYLFYCTCMLCVDFVDYGKET
NDKLYYFFGMVHFLNAWMYWYAWKDVRWRDPILYPEYLNVVGAALYLWSS
SLYRRESGPHDAATSHIHVIETCAAIVELLACVGWAFTWHLTYERVPGRG
YTLDDPDVWALLTIFAAAITYVVYNLQILAHPDWYSDNEVYFLGDISYAM
NGVLYLLAGLRDDGWFWWMPLMGNFYTFAPSSSSPSSMGVEAQEEEMKSP
LLAVVVRREKVEKKERQNQIWNAWGMPRKKIQGFGMIEESGTRGAIA*
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Synonyms
Publications