jgi.p|Nanoce1779_2|629396, gene_3142 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|629396
Unique Namegene_3142
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:753241..759473 -

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Properties
Property NameValue
TranscriptId629482
ProteinId629396
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:753241..759473 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03320NO05G03320Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629396mRNA_3142-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629396mRNA_3142Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|629396

>mRNA_3142-protein ID=mRNA_3142-protein|Name=jgi.p|Nanoce1779_2|629396|organism=Nannochloropsis oceanica|type=polypeptide|length=1294bp
MCHVVHITHSPTYGYPFLLSLFEGMARLRLNVYEAATRTPSKDITVAWPI
GQGASTPTQALFSSLQALVHSHTGLEPCNQLILYGDVAYPIRDDADVEAL
MLPAGDPEDGSFPVTSATQQAFISVLPASLLRASIQDGCSRVYFGERAVV
QPCYVIPGSDQSVCETCQALCFPEGLLLAKVGAPMEPFVCGAPALCSEGL
GVYLFKERLHEANTIWGGEGEKEGEATRTIQAEESRNSCATTHKAFMLSP
PALALLATFRQAAYVQQALGFDQYSREAAEMMARLQSGRSTILAYDAPAL
KNKALSTIPTAALHARAMMAGGDPQRNPLHFQDILLRELLAWFKHDFFSW
VNNPPCERCGATDTTLLGGAAPTPAESAGKAGRVEVYTCESCQAQTRFPR
YNDPGVLLATRRGRCGEWANCFTLCCVALGFEARYVMDWTDHVWTEVWSP
LEGRFLHLDPCENAADTPLMYEGGWGKKLSYVVAFGKDHCVDVTRRYTRT
FESQLLSRRQNVPELVLAQQVAALNQQLRNNNSSGRSVQERARREQFELH
SHTVLGEASELVYIKPGELRGRISGNAAWKRARGEDGLGEPGRELECGGA
ETPCASSLAATCAVPPAQIERKASEPMIQREEMAGLPLWSYVAGGGSLLV
SATSVGSLKGESLTLLGSYGGFGPGAVTINGLPVAVGRRGLNVVVLDLVR
SVIEQSVAFDVPEDGDGDAVDDDTRVVAIAFLREKLAQGMVVVAVILGSG
AHALCQAGADLWKDAFGSPRKIPGRSEPWLVITGGSTDAWVTAETRAAGQ
GPLKVIVTMPLSPIHPSITSTPSPDMKVWHDAIAAVPLVHSMGAQGDGVL
SVPPLEAYQAMCTAFSQAPLAGFSYKAECGLMGMAWTSGLRGGAGWRTHQ
VSSPMLAPDGEGLKVRIHKAFTKLVADGMTPNMAALQALSHIKETMLQEK
QQASASVTRFKVVYGPLIGTSVHPPLSETLHVFDDSEIATPVQAMAEWQE
SFPLLIMRRVRIWTSPRGMLGLQAGYQPQGSADSPIYWAPVHHPSSKSPS
SAFVNEEVTGTLVLGREENLVMVGIHTSDACILGVNFTTTAQRSIFFGLS
DPSGTATTSLSVPRGMEIVAFYGIMGGEGMQRLGIVSRRQVSKSWGNLSL
PADAWGIYTACPVDRASRQLLYWSGGEKIKVVAALRAARRYLENCLKDPS
NTTFRLIRVRSKFFLDNIGSLPGSGSLMQALGFEHVAAIATVAAKTEGHE
PEEEACYMLPLPNVAPSTLLYSVKRLDTNLTRIMAEMNSTTAV*
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Synonyms
Publications