jgi.p|Nanoce1779_2|638083, gene_2898 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|638083
Unique Namegene_2898
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:198540..200633 -

Link to JBrowse

Properties
Property NameValue
TranscriptId638169
ProteinId638083
Product namePhosphoribosylglycinamide synthetase, ATP-grasp (A) domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:198540..200633 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0016742hydroxymethyl-, formyl- and related transferase activity
GO:0008168methyltransferase activity
GO:0004637phosphoribosylamine-glycine ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0009113purine nucleobase biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G01080NO05G01080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638083mRNA_2898-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|638083mRNA_2898Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|638083

>mRNA_2898-protein ID=mRNA_2898-protein|Name=jgi.p|Nanoce1779_2|638083|organism=Nannochloropsis oceanica|type=polypeptide|length=698bp
MIRQRYQGRRSAGLITSGSPIDPTDTTPTNILIIGNGGREYALAESLLRV
STPRKIYVAPGNAGTQQLFPPRVLNVPELNVNDGEDIVAFARKEAIDLVV
VGPEGPLVGGLGDQLREKGIPCFGPNAAAARLEGSKAWAKEFMQRHHIPT
AVHATFSDFATAGDYVQQHTLPVVIKVSSLAGGKGVTVAATYGEALAALE
AIMGPAAVFGIEAGREVVVEECLVGDEVSVMAMCDGNRVVTCLPCARDFK
RLLDSDKGPNTGGMGSIAPVPGLTPAVESKMRDILQQVVEGMKEEGHPYH
GVLYGGFMLTRKEGGKEEGWEEEKREPKVLEFNCRFGDPETQSLLPLLPS
NTSLAALMLQCVQGASRETVAEKGSGTEDAAWEGFAATVIAASESYPTSS
WPIKAHIIHGLPQAACVPGVHSVVHAGTVRKVLANGARVMTVSGGRVLGV
TGKASTLRLAILQAYHGLSEIFFQGMQYRTDIGADAVRSARAPVRVAVLG
STKGTSILPLLKGKPGQYDVVLVLSNKELENGLLENARAAGVKDCRYVGG
EGEGGKEAMEKIEVAMEEAQAEVLLLNGYNRILSPRLVRILRGRCLNVHP
SLLPDFAGHFDLAVHQAVLDAKRTQSGCTVHFVTDDVDQGPVLVQKTCVV
EPGVDTAAMLKAKVQALETEAWEEALRVYQEDLPRVTQTIMAMGVKR*
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Synonyms
Publications