jgi.p|Nanoce1779_2|580919, gene_2608 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|580919
Unique Namegene_2608
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:759608..760716 +

Link to JBrowse

Properties
Property NameValue
TranscriptId581005
ProteinId580919
Product namemalonyl CoA-acyl carrier protein transacylase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:759608..760716 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005488binding
GO:0004314[acyl-carrier-protein] S-malonyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006633fatty acid biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL072ncniL072Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02760NO07G02760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580919mRNA_2608-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580919mRNA_2608Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|580919

>mRNA_2608-protein ID=mRNA_2608-protein|Name=jgi.p|Nanoce1779_2|580919|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MMSKSLMLLSLLSPVAFAFVSRAPASTLSRAASTHARKNLVKASAVDYTT
AFMFPGQGAQYVGMGAQVAEEVPAAKALFEKASAILGYDLLERSVNGPKD
LLDSTAVSQPAIFVTSAAAVEKLRATEGEAAVNTATVAMGLSLGEYTALW
YAGAFSFEDGVRLTKARGEAMQAAADLVDTTMVSVIGLDPDKVAELCSAA
SKKSGEKIQIANYLCPGNYAVSGSLKAAQVLEEIAKPDFGARMTVRLAVA
GAFHTEYMAPAVEKLKEVLAKTEFKTPRIPVISNVDGKAHSDPEEIKAIL
ARQVTSPVQWETTMNDLVKGGLETGYELGPGKVCAGIMKRIDRSAKMVNI
EA*
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Synonyms
Publications