jgi.p|Nanoce1779_2|580200, gene_2390 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|580200
Unique Namegene_2390
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_5:223119..224682 +

Link to JBrowse

Properties
Property NameValue
TranscriptId580286
ProteinId580200
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:223119..224682 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL071ncniL071Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580200mRNA_2390-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580200mRNA_2390Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|580200

>mRNA_2390-protein ID=mRNA_2390-protein|Name=jgi.p|Nanoce1779_2|580200|organism=Nannochloropsis oceanica|type=polypeptide|length=349bp
MVKRCWMLPTAAAVVVSTFLLSSTPAPAEAFLPPVPAPPAHFAAIPSSIS
VLSSRARLGAVQMIRPAGLQSSLLNRFRSKPSASPDRPGVGPPRNNKDED
EKTKKQAAATSSSVRGSSIAGSMKGSDEAGQMVDKAAGLGQKLSRFTAAV
LEEEGDEESARVLKTMKGIPDNFLKSSIPADEENIRGASAVVGALAGFVL
GGPLLALIGASWTSYSCTVAQSDAGEAARGTGQWALNLHNFVAKVNRKKS
FVQKLSLSLGGLYRRFRKEVAPEASVLDKAEASLQSTLDFTGRISQEFDL
PGVVGKAVVKTGELSVVAVKSLVKYNDENKVTDKLWAWVRKEVLKEKK*
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Synonyms
Publications