jgi.p|Nanoce1779_2|637279, gene_2309 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|637279
Unique Namegene_2309
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1362363..1370775 +

Link to JBrowse

Properties
Property NameValue
TranscriptId637365
ProteinId637279
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1362363..1370775 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00002851-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0008270zinc ion binding
GO:0005515protein binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0044267cellular protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G05200NO04G05200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637279mRNA_2309-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|637279mRNA_2309Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|637279

>mRNA_2309-protein ID=mRNA_2309-protein|Name=jgi.p|Nanoce1779_2|637279|organism=Nannochloropsis oceanica|type=polypeptide|length=1147bp
MSCAACGAKTFTARYRLLNCPLLRLQRQQRDKTAEKRIWTALDFSIQLQR
LTCFPSPAGERESSSTHGLGGRQFAATSTFMLPKEEGFDEHGRPIVIYQS
MSEEEGEGGDEGEEGGSNTGTESDEEYDYLYNEEEEEEEEEEEEEGRAAY
GQSQRKEDKDASCSDSPSSSPFALPSHLLSYLSPSRADAGGGDTGRANGY
GSSSSSSSSGNRRMRRRMTAVEKKEEELKKEEEENERGSPLIFQAPPSGR
QYWMDDKLCKTCYECEQPFTLLRRRHHCRLCGQVFCAPCSSFYVDGSAIG
LGLHMGGSSPSSVLHLFLLPPTFSCLIPASSLGRHHQQQEQKEQQQHQHQ
LQQQHLLSALTQRVSQQQQQQQQQQVEEEEEQQLKLSGAEGVKESGKEGE
GGVDKGGDKNTKAEEARLRSKGDIRWRAMVKQLVEALWVETLGRLTQLVV
ERVDPDVHSGDQMDVGAYVKIKDIPGGTVEDTHYVDGLVFRKNVTHKAMR
GRIRRPRILLLSGGIEFQRTESRMASLETLMDQEARYMQILVDKLLALQP
DLLCVGKAVSRHAQEQLTRRGVTLMQHVKPEVLERLSRHSGARILASTDH
VMTQHGLRALGTHCRGFRLVTFPLPKKEEEEEEEEEEKGDGHGGGVKSVP
AGGRAGGREREEEGEGVSVRDMPPPVVSSPHRSTRAKTYAYIEGCPPSLG
CSIILRGEEEAALKEIKSILRLVVSHLLMTSVWMRERHQCSTAEVKRISY
YFSPQDVSLGQFLLDGRLVITTRKLPRSLYDIVQGRSSTNSSSKSTTSDK
SGNSTSSTNRTNCSRGSSSSSSGSQDIRKRRQQQQQQQQQQQQQQQQQQG
EQGEAVRPIFMCSSCKRCGPDVVVTPLVEMSHETRKWSFGKLLEVFFYNL
TAHGRRSVAGCTHSLHRDHILWFGSGDIAARFEWEPAKPYHVHVPSAATL
LEAGKEEAKEDEVTKALMKSWELATLFFQRFQERLSDMREETRNVSMALE
TLLALEGGGGREGGGGKSSDVGEGGGGGGGKGEGGQGGEKVPGVVTPRLG
SPTRIGRGEGGEGGKEGGKSGLTSETASEFQMVVKEIETLEGDVRQFARA
IAECLSTLMEECSSIKNKNNNDCREEEEEEEEGGEAGKEGRKRRAD*
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Synonyms
Publications