jgi.p|Nanoce1779_2|579683, gene_2268 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|579683
Unique Namegene_2268
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1225502..1229422 +

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Properties
Property NameValue
TranscriptId579769
ProteinId579683
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1225502..1229422 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00038522-isopropylmalate synthase activity
GO:0046912transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0009098leucine biosynthetic process
GO:0019752carboxylic acid metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04810NO04G04810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579683mRNA_2268-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579683mRNA_2268Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|579683

>mRNA_2268-protein ID=mRNA_2268-protein|Name=jgi.p|Nanoce1779_2|579683|organism=Nannochloropsis oceanica|type=polypeptide|length=661bp
MPSSSCNPKPSSLSCCTSSRIRQRVVVASSLLALAAAATSVTSAQAFILP
VNQTPLPRSTSTSRPRHSSPFLWRHHAVRSSKPTIRMMATTVSKTSSSST
ASNPQDDDIVRPIPTRHDIETGRDPMRVKIFDTTLRDGEQSPGCTMTAEE
KVQVARQLSRLGVDIIEAGFPIASPGDFDAVKRIAQTVGNTVNPPIICGL
ARALHKDIETCWEAVKHAAFPRIHTFIATSDIHMQHKLKKSRAQVLEITR
EMVTYARSLSEDVEFSAEDALRSDPAFLYEVYSVAVEAGATTLNVPDTVG
YTTPSEFKSLIRGLRANVKGIQGVTISVHGHDDLGMAVANFMAAIEGGAR
QVECTINGIGERAGNAALEEIVMALHVRKSFYNPRFGRTPESELALTNIC
TTEIYKTSRLVSTLTGMVIQPNKAIVGANAFAHESGIHQDGMLKNKSTYE
IMDAESIGLAKNGLVLGKHSGRAAFRSRLTELGYESLTDAELNKAFVRFK
EVADKKKEITNLDLESIVNDEMRLEFDAGNFELVRCQVICGDSQVPTATI
GLLNKETNEEIIMAATGTGPVDAAYVAVTKALGIDKIKLLEFAVSSVTAG
IDALGEVTVRLEDLSTGMIYYGRSANTDVVVAATQAYLSALNRVAVSRGS
LPLHPQFGKI*
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Synonyms
Publications