jgi.p|Nanoce1779_2|563653, gene_1999 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|563653
Unique Namegene_1999
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:537062..537688 +

Link to JBrowse

Properties
Property NameValue
TranscriptId563739
ProteinId563653
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:537062..537688 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|563653mRNA_1999-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|563653mRNA_1999Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|563653

>mRNA_1999-protein ID=mRNA_1999-protein|Name=jgi.p|Nanoce1779_2|563653|organism=Nannochloropsis oceanica|type=polypeptide|length=209bp
MVPSAKMRTLIGILRETRQSDPSGKFVVFSQFPFGTIAPCLEQAGFPCVS
VTSQCRAEQRQQAVGAFTNKAEVKVILVGMGVGAAGLTLTAAKTLILLEP
SHNLADEAQAMSRIHRIGQEAKCVKICVLFTRGTIEERMLKMRLDEGGAV
ALHQGGRGGGGEGGGEEGAALSVAATGGGEKSFQFSLASLQRLLGLDDGV
ERREENHD*
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Synonyms
Publications