jgi.p|Nanoce1779_2|578453, gene_1934 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|578453
Unique Namegene_1934
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:387105..389459 +

Link to JBrowse

Properties
Property NameValue
TranscriptId578539
ProteinId578453
Product nameAAA domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:387105..389459 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01470NO04G01470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578453mRNA_1934-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578453mRNA_1934Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|578453

>mRNA_1934-protein ID=mRNA_1934-protein|Name=jgi.p|Nanoce1779_2|578453|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MAGPPSPPIEQVAAVTSNVTHPGPSAMHSHLHLQDHRHQQQDPPAAATVN
INHGQHQSSEQEQELQHQGSDGHPRLIKIVLTGGPCGGKTTALARLSEFF
RTHGFRVFTVPEAATMLWSNGVALSDVLASEETQYWFQDTVLEFQMHLEN
GVEKIARSLNKPAVILCDRGTLDGAAYVTKDMWETLLKRKGLELLSIREG
RYDAVFHLVTAATGAELYYSLMNNETRTESPEFAREVDLKTQGVWNGHPK
HFVIDNSTDFEGKLARVQNQAARLVGLPQLPRGADRWYLRRPHDPACFTV
PYEKTQVRKVYLVNVGKALPDGRNVSVEYNYVEERSQDGSVAYAHTSKQR
LDDGYEAELKRIIDEREFHFRATTMADPSRKEVFQTRYSFLWAQQAFVVI
DHHSDKQEFGHDLFTLRRQAEGGTPEFPPFLDVGEHIEDEDGLFPFPTRP
APSPVKKETVV*
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Synonyms
Publications