jgi.p|Nanoce1779_2|578312, gene_1887 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|578312
Unique Namegene_1887
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:270398..272497 +

Link to JBrowse

Properties
Property NameValue
TranscriptId578398
ProteinId578312
Product nameputative apoptosis-inducing factor 1
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:270398..272497 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043738reduced coenzyme F420 dehydrogenase activity
GO:0043826sulfur oxygenase reductase activity
GO:0043883malolactic enzyme activity
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0051341regulation of oxidoreductase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G01070NO04G01070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578312mRNA_1887-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578312mRNA_1887Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|578312

>mRNA_1887-protein ID=mRNA_1887-protein|Name=jgi.p|Nanoce1779_2|578312|organism=Nannochloropsis oceanica|type=polypeptide|length=575bp
MLRVLFPRQTAASSQTVRLVLAASLSSSSSVSSSRPSQAARPRRSVSSRW
STGARSALAATGALVTAGMAVALCETEEINDERSLTGAVEGVPIKADLTN
QEYKLARQNTTRKVKNHYQYVIMGAGTTAYAAIETIFNRQPQADILLISN
EAALPQPDVFRHHALSAPLLHSYNEWRRHTTSKLESEPDAISSAPITLLL
NNEKSLQLDVDKQRILLQDGSYITYDRCLIATAGKDRGLWAVDRRKISYS
LRDRINTCSTIYDFEQLDSLHNIMANKHVSVVGGGFLGTELALALAVRGR
ETGMTVSQIYAEKGPLCRYIPNYLGMHVQRLLHGAGVRYVNERLVTDVKD
GGEDAPGALRISLMGWNKESIYTDYAVLAPTHVEPCVEVAVKSGLELDGS
TNGIAVNQQLEAVGNVFVAGGVASYYDAALGRRRVEMFDHSINSGILAGK
NMTADEQRPKRRYTHQPMYRSLLKDIDVVCDVVGEIDSKMHTVGIWVNNP
VETEDEAETYQRGIIYYLRENRIRGIMLWNASDYLERAREVINAQPNIHN
VDMLKRQIALAPDAWLRVLETSAD*
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Synonyms
Publications