jgi.p|Nanoce1779_2|286714, gene_1842 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|286714
Unique Namegene_1842
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:142580..150129 -

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Properties
Property NameValue
TranscriptId286800
ProteinId286714
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:142580..150129 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008104protein localization
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL059ncniL059Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|286714mRNA_1842-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|286714mRNA_1842Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|286714

>mRNA_1842-protein ID=mRNA_1842-protein|Name=jgi.p|Nanoce1779_2|286714|organism=Nannochloropsis oceanica|type=polypeptide|length=2272bp
MAWLKSRTVRRKPLLVAEVKEDKVTNVYDIDVGLEDFTLNILVEALMASV
DVTLESVNALMDVLAAGTPPPLPPSSSVPMDGAAPESPLGALPVSFSLPS
LFPSSSFHSPLRVRGVGPVMEAIGEGAGEDEEEGEDGLDHTRLSASALQS
LTLEEERREGGGAAPMGLRVMVRLVNPGLILIENARNFDSRAVSLRGTFH
VLYAVKYEGGVGGGGGGGEGSTETIHVDAQGLEAFVDVVRGGGRGGWGGI
EGGRKGKGPVQIVTPFAVGIHIKKQSEQAKLLISEMIGNVDRVLMRVAYH
DVRLVQGILTGLGEAFARYAEATTLSTSAAAAAAAAAAEEGGAGGGVRRE
GGGEEILGPVVDADTGGDEYEPVADLEEGGKEGGEDGGGSSVAVQRRAQV
QASVNLDVLEGEEEEAEEEGMTLGLTAADEELMDTKSTSVTKTTLDVAGI
EILFINDYDGREQRVMEISVEKLHLALEQCADAYKGEGGVLLQARFFNPE
VMFWEPVLEPWEARVKVWTEASGIVLSVGTSRLLYVDVTEAFIRTLSRTH
SLLLSVSSSSSSSSSSSSSSDGGSSGNPSVSTMTGAPSTTLLLPSSSIAA
SSPSLSTIGAAQYLFTNKTGLELVVEAPSSFSTSPSPASTSSSNGILVPP
NVTVALDLKEGGLGRAFSRGVSEVANNSNGSTSSSIRSSPMVNVSFTDAL
GKDRRPLQKLKTDVPGVFIYPLKPTVEPKKAYAQPVVEETWENERSDCLT
CRWRSPFLPADRGRWSDEQGKRERSRESIALPGPEWMWLDDWHVDMGLGE
VGTEIDMEGWTYGIEFAGFTLNRIKRTHRDMDGVRRRRWIRTRVPLPPAL
DDPARPLSVAWRVNLLPDGRTELSVETTVQLVNETDVALEVLAVTDPALP
PHPVDPIPPQSTLCLPLLLAYASTVRIRPMSLEVNIDGEGGDRSPYQWSE
PFLVDRGTGAVEEVVVCPPSSSSPKPSPVCVVVDAIVTSAGFKSIFLRPP
FLFENLLPCHVWVSVSPHDKELHTRLIAPGAKAGVLSKEPQISQSVRIRL
APNGGRRQGHKSSNCSSSLTCGGYEWSQECELGGIPGKFQNLKPFVLPNH
LTGEEVGVTGWVVRVPGSQVRLQMAMFVRCWIVDRTGLNLGFCEDPKKIQ
SQGGKGLGRARSRLSLPASFSGRGVGKGREGERGGRWGAGRGGGVMSFVP
PLVQIVEVQVEGAKEGGRVGGGDYEVRVVDNGSEIYTDRPCVFVNLPARL
RRKTALLTPNGDRGREGGRVVSFKVTEEAEVYLLYDMSGGGRREGPPGWV
EEEGWRKVEELPMIVVNTQRHEEGVLKFQPYRKYVGKMEHVVLGGNADER
KEGMRKGRGSRNNNYVVVVVQQPAGGECGVGGGGGRGGRRGFAEAASTVL
VPSASEMEEEMDEEEEEEGEMGMLLYDPRKVKKVSVCVGEDVGTWSKPLD
VEGVVDRGVFDVSGEDMSYELSLFISVCPGVFGQTKLVTVGPRFVIVNCM
DEDVWLRQAGVEDCPPLLLKARGRTPFYYASKQVQKRREMQIMIPGKTGW
SYGGVGLENVGGTAVLLPEEGDPRRRAPTVVHVEVKLGEGEEECAVVAAL
WKPRPVDPPLYAVHNYTPFEVHLVQLDVRRTKPRWVLPPGQTTRYGWEYP
CLRHVLFLRLFNPKLPEKKFCCEMYLDKVLDGEVMDMGKGHGKIYLKVLA
DNGSKVLKIVTSKSMLRPPKLPSQREFTFRMALPGVGLSLVGGDEEEGRR
EIGFVLVKELFVEYLQSTREREVEVKVKSVQLDNHVRNAIFPVILCPRTT
CKDGENFIHFSLLAETTTRCAAATSSSTAATNTTTTHHTIRYLALRVLAM
DLQLDLRSLLRYLHFAQQLVFLDYDRASAELHPYRFVNNLRSFFSYAEPL
PWVDVSQTCQSVTNTRVYYERIDLHPLSVALSFAQTVADEKGVGVGRNVM
EVVKNLASISRAPLQLKSFQVEHAMETPVSFTHIVVAHYKRQAFAQILTI
AGSLSTLGSPVDLVTSVGTGVKDFFYEPINGLVHSPKEFAKGLKRGTTSL
LKGVVSGALNSVAGVGDSLNRNVALLAADREYTAAREQRRQAATAGGTGL
VDGLIGGGESVVRGFTDGISGVFLAPVKEARTGGVGGFLKGVGKGVVGLA
VKPLVGVSDAVVSVIQGASQAAQDLEAHVPVRPRRALPRLSVTGRKVLTD
YSAGAARVQEDMEVGDSYVCHVSLENEGKDVIFTDKYLSVVNLAKGGSVW
KHPWRDFACCGGIGVRWGMAR*
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Synonyms
Publications