jgi.p|Nanoce1779_2|13810, gene_1679 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|13810
Unique Namegene_1679
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:1218592..1220487 -

Link to JBrowse

Properties
Property NameValue
TranscriptId13896
ProteinId13810
Product nameCyclic nucleotide-binding-like protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:1218592..1220487 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004367glycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0005216ion channel activity
GO:0005249voltage-gated potassium channel activity
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
GO:0006813potassium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G04740NO03G04740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|13810mRNA_1679-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|13810mRNA_1679Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|13810

>mRNA_1679-protein ID=mRNA_1679-protein|Name=jgi.p|Nanoce1779_2|13810|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp
MLAQDQEGGTWIIDPGALWRIRWDILILILIIWTSYSVPYRASFSTRSSG
IEAWSELSIDIVFCLDVFLNFITAYYESEGILQTNPRAIARRYLRGWFFL
DLVSSIPISELSSALSPTLARVFLALKFVKLLRLVRLMRYIDSKEMAMFF
TPSMLRLFTTFVLLAWIWHVITCLYWYISISQGLGSSEWTPDADYHHNTD
ILNYFLCFLWTVQATFSIQTYSPPEKMAEAIFTIFCYLVGIFLNAYVIGS
AGSALQSMDQDKNEQRQLMDRIITYMKKRQLPAYFQRIILDFYNYMSAKH
SEQGILTDLPPAIQLRLSLLLNRELVKNIPLLKQLELNTIIGLMQTLQST
MYMPGEHVFKTGEKGQSLYFVKNGQLEITLDNVNVISNLQKGEMFGQVAL
TTDSNHDFNVRAAVYSEVLSLPREAYEDLSAESEKFMELVEMEAIKQEQF
IVKAQKNMQRLAKMNRMGAGVGREGARNVEAGGGGVGGGGGRGKRAGNNG
GGPNVRESIQKTKTISSVVGMFLKNGSSKVTPKR*
back to top
Synonyms
Publications