jgi.p|Nanoce1779_2|535658, gene_1505 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|535658
Unique Namegene_1505
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:797806..802072 +

Link to JBrowse

Properties
Property NameValue
TranscriptId535744
ProteinId535658
Product nameaspartate-semialdehyde dehydrogenase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:797806..802072 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0050661NADP binding
GO:0004073aspartate-semialdehyde dehydrogenase activity
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
Vocabulary: Biological Process
TermDefinition
GO:0008652cellular amino acid biosynthetic process
GO:0009086methionine biosynthetic process
GO:0009088threonine biosynthetic process
GO:0006520cellular amino acid metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G03110NO03G03110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|535658mRNA_1505-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|535658mRNA_1505Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|535658

>mRNA_1505-protein ID=mRNA_1505-protein|Name=jgi.p|Nanoce1779_2|535658|organism=Nannochloropsis oceanica|type=polypeptide|length=385bp
MRAVLPVMCLFLSYASAFMPTMPASALRATTTTSAWRRRTGVALTPMMTA
VDGGKLKVGIVGATGAVGEEIVKVLGNRQFPVSELHLYASARSAGKSVPT
PFGSVTIEEFELGNARGLDVIFLAVGGDFSLKYAHKLSEGDGPVVIDNSS
AFRMDPDVPLVVPEINHKTAKGKKLIANPNCTTAIGLMALFPLHVAYGIK
KVIMSTYQAASGAGAEGMDELKTGIASFVKGQPIKNEFFAYPLPFNVIPH
IDVFQENGYTKEEMKVTWEARKILGVPDLAVSCTAVRIPTLRAHSEAIVI
ETEKPVTPEGAREVLGNFPGLKVVDDTSTKQYPMPLTATNHYDVEVGRIR
QNIVFGDHGLELFVCGDQLLRGAALNAVIIAEML*
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Synonyms
Publications