jgi.p|Nanoce1779_2|5463, gene_1395 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|5463
Unique Namegene_1395
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:454086..457301 +

Link to JBrowse

Properties
Property NameValue
TranscriptId5549
ProteinId5463
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:454086..457301 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL001ncniL001Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02090NO03G02090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|5463mRNA_1395-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|5463mRNA_1395Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|5463

>mRNA_1395-protein ID=mRNA_1395-protein|Name=jgi.p|Nanoce1779_2|5463|organism=Nannochloropsis oceanica|type=polypeptide|length=768bp
MPLINTTVHFINSTSITIPHIHIGQMWVLEFLPRPGDTDTPQLGTGGTFE
DTQSSTASGKKKNKKPYYHLVAGDFVVGRKNCDIIYNKYDTTISRQHARI
TVLPLQPEEVIAVGTAQTIQVTDLGSRYHTLVNDVQLPPQATHILRSGDV
LTFGRYDTKARIWHKPLVLCLSRLSATTKQTLKEAAAKAGAHIVDKWRST
CTHLIVGKTATATTKVCLAVVNSRPVVDVKWLMQGVLGRSSVGVSLPEPA
KYLPDWSSVAMVRDLNKTRNSLFGELLFLYVAADETEELVKDAGAGVEKV
YEWQAGEGEEEGEGVERRIEDAKRMGGKQFVVVIDTQKTPLKKGAVGMME
RLVKIPGVYVTMRQQVAESIFRNRPLCCRDGEVIGGRRRGGGRCRGGGGR
GRAEGEGKDIEGGGGGEAEAEAVGATTAAATAATAATAATAATKPTAIET
LANVLPSPPPGRAAATAAAAVTSASMQMEKDEEVDVSEVVVANPSNPSPP
QRTECHSLLTAAVPNSPSTHIRHQPLAAEEEEKEERKEEGEEREQEGLES
AGKNIRKLKSVEEDVNQAIAAAATGAAAAGAVTAKAAGKKVSPPPRGVGR
GNNNKDNGNLSMPPFPSSSSCGPTAKAIATSNRRPAASARGSASHHHHPA
PPLAPPSLLPFKPLDPLDGWTVAPRKKPPPPPSSHLAGSDEEEEDGLGEG
RMKRKEWKEEEEQEEGETVVEERDLLVGGGRGYYFEDKREGEEEEEIEPM
QYVNPSKAAPPTPTNTS*
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Synonyms
Publications