jgi.p|Nanoce1779_2|548970, gene_1338 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|548970
Unique Namegene_1338
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:316824..331192 +

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Properties
Property NameValue
TranscriptId549056
ProteinId548970
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:316824..331192 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01580NO03G01580Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|548970mRNA_1338-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|548970mRNA_1338Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|548970

>mRNA_1338-protein ID=mRNA_1338-protein|Name=jgi.p|Nanoce1779_2|548970|organism=Nannochloropsis oceanica|type=polypeptide|length=4120bp
MATDRQEGDFFGDDFGQKVDLTARIREILRNYPAGTSILKELVQNADDAG
AREVRLVIDARQHNTIHLANPSLASLQGPALLCWNDAEFTEVDFESIQRI
GDSLKKEESQGTKTGRFGQGYNAIYHLTEVPLFVSGRNIVMFDPQASYLP
YVNPSNPGKMIDFMNEKHQKVLQAYPDQFLPVQGVFGCDVMGEGGREGGK
RYKATLFRFPLRTTAQAATSRLSKQAHSVASITAQLETFAIEAPRMLLFL
KNVEQLSVWHWAGERGEGGREGPVRVAYVQIANITAEIRGKRSMVMGVPA
KSNTKQQQQQPPPAPVVCDYILETKASVAPTAPSLHETWIVCNRLGGGKA
SVLAAAGEHAHLKLIPWSGVAGRVGYRISNSDSSRLAYCFLPLPVFTGLP
VHVNGFFELSSNRRDLWWGDDMSGDGQMRAEWNHSLLCEVAVPCYTQLLS
LAAKRCGPGTVYEALWPLKGNGPAWTALMDSFFAAVLPLPLLHTLLGKAG
GGGSWVSKGGTLADAVAGGASLNLERVLLDEGLPVIHTSHPGLEDVLESR
KVVPRLATPAFVRAHFRTFPSSISAISSTKTHPALQRREAVLLLLRYCFS
DLSDQAFTELDGLPFLLTADPKAEPRTIVLFQGLSDGHHQMDQQQVVTQL
LTLGFPVGLALRACRLSGGDMEKAMAYLTEQREVVEKAGEPFELEGMCEE
VALFAPVASRLLRFDELPDKARAILQAPRVQKASNVRTFSASYLPVVLRY
ILPHAWRDVARVAWNAQAAARSSSTMTSLAPPTLVWFLRLWRYLLAHMPD
LTPLAEGLPLLPCNEACVARLSTKLPLLLIPSHSTAVTMVSSALLSSLRT
MGVLTVHQELVAAIGEAKLAAALRAYVQPFRRAGVLACLRLLFAQHQQKQ
PQMDFKQVLTKALAPQAHDSFDALRALLVSEPLAELTKDDLLMISSLPIF
PVYGTPAGKRCYMPLQAKPLYLLEGIPSCKIILLEGLLTTSFLRMHDDDV
ERTTTTTSSDTNAGSISSSRSTTHPLEPALAKKLGVQTVSKVAFLKQHFF
PSFATSDSTLRARAMLDLVLSDLPSLTQVDPLFLHALQRLAFLPNVAGIV
ARCQDMYDPEVEELALLVGPDFFPRQDFATPEILPLLRQLGLRSTLLYSD
VVHIARSTHELAEKPLTAAEGLIRAQTLFRFLNRNAERFFVPVREQEAEV
VRRKKALSAGLFTRALSLFGEGRTAREKARQDQLDEDERQRRVMVVELKA
IPWVPVLATKPLPFLPWRTTASSSRGSSTRILAAPSHARLAEDMWYGSSL
FGIIPSETPVAEEVKYVFGWKNPLPPSMVARQLVAIAESFHAYAATVTAM
ENDAVQAMQQVVSSVIPVIYQKLSLTLQNSTGEEEQSVRRYLHGAPWVFV
GDRFVEAEQVAFASQVNATPYLYSVPPDLACFAPLLKMVGVRPSFGPSDF
VQVLHNMAMETGAKDSSSGSKFAAGHEDGGTMAAVTEPVALRPFQLELAI
ALVQRLSDEVMQVSDWELFAPDEQGKLARAPELVYDDAPWLSKKTQRRSD
IRFAHPKISSVTGEKLGIRSVRRLLMESHADTMDFRLPAGEAEAFGQSEA
LTRRLRHILELYPERAEISELLQNADDAGASTVRILYSERQYGTSTLPAL
HLVIFDPHVKFLPGATRQQPGIKIRFVGTDLLAHFPDQFEPYTLFGCTLQ
ETFLGTLFRLPLRTAEQARDSEISKSRYDSATVKELLASFQTTIARFLLF
LRSVDTIEVYVAQDKMTEPKLLYRASRRMEARMAWTEVSTFMTGPLRAPL
SKEAFYAKLASTPTAHLPRVKQLMEVWYEDGKIDFMGRVLSSRMLRLDEF
LVLAGLGGGAALAMAVDRSNRHMKLIPFGGVAAHNVPKRGQVFCFLPLPV
DSGMPCFVNANFELSSNRRDIWANAGGEMTGEGKLRSDWNQALLQDVVAP
LYIQLQQQQQQHCLPLTYYYNLFPLPEAVPTHFQVLVSRFYQLAAPMPLL
WSEVGGGAWAPSQTAMLMSMPDKDKEEDEAARVAARLRDVLLMRGCCVVS
VPMVLKRVLVAEECCYNEVSPQLVRQLVREARGMGSATSIGGRQSFMGPW
PASQEDAQFLLVYCTSDLLEKEDLAPLDGLPLIPLADGSLGNFVLLSSAA
VRASVTDGPVLHSTYFIADDEERPLFEHGQHVLVVERERLLPKVAALFDN
AALMRPTNVVRLAPEYLDSLLFELLPPPFEDKREVPWRPGDVVGGRVVPD
SEWIYGLWAYLTSSPTATVLDVARVCGKWPVLPVLQGPDLKPMLVRLDSS
LPLLHMTQTLLPSSPKGVEKLEQALVNLGIRVVNRNVIPATVESIFAAPE
SQVLETVSSSPSPGGVEMKSMTTEAGVQILRALPIYESYESQQHLNDKTR
SSSNPPPMVAFCALNSTEHWLPPDGVDPRLLDTGCPTFIKSNGPDDLALL
EFLGLRHIPLDIFYRKYVLGALKSLEPSVRDKAVVNMLSDLPRLLQDEVT
DRKGFVEELQLTAFVPNGARPVAILRRACDLYEPLQGGLENLLGQDAFPA
PALCTSELLSRLRGLGLKATLSLQGVIMSANSVGTLAGAGEGERAVRRGK
DLLRFLDHHMEELAEDTMSAEGELYLGGEEKGQQETGDDETFVKALRAPA
WIPVRQAPLHPSLPWPSSSSSSRAALPLVLPPRQTRPQADMWLCSLRKGI
AETDVSSPLLRQVLGWEDAIDPITLAHQILGLSAAFQGGRGGHFRQILNK
CVPEIYSALQEQLVLMEEDDEPRTTPTVSTMSMAPTTGRQTGGAWIWVSD
EFLPTTRVAFSAPLHTRPYLVQVPSELVTSYAPLLRLLGVRESFSPSDLA
KALEAMYRSAEPRTSLSPADLTQALGLLRALHRTPFEDRQQALHEGSMVV
YAPGEDGVMHRMDELCFGDAPWLLNTMQQGQINLKFVHAGVKNEVARGLG
ARSLREALLSNQCAVASIPCAHAQEIRSFLAPAARRAEQMQQQKEEEGGE
GDVTGDLVLQAVVDLLELADDVGCPGVEIVVDERVYGQESLLHPLLAEAQ
GPALVVYLKDVVIEEDKARGSYGWPVAGLGLLSLFHLTDLLEVLSGDQFL
LFDPCGSHLEDDIGLSAASSLARGDGLVETPLARRYTMAGQNLHLRFPDQ
FSPFMSLSTWSDSVESSSSSNGEGSKGGSAFHFKGTVMRCPLRRRESALS
IHVPGLDKVSLALPRMLDSVPTSLLFSLSLEKVIAAFWAKDASAPQPLMK
AVVTDPNLACLHRERRALLENKEWGKFKLAHLWKGGGNAAPMSIHMVKVS
CEARDLPSRQEQWLLLDALAHGASREAALSEQLRNCFGKPLLPLISAAAR
MEVCPQGTPLGGEMRWSASRPGRAYSLLDTGVDLGLPCHVNAPFFLFDAL
RPVLNEHVAQGRMIGGYGFTGAMVWRGEGLDELSRCVKWNEALLSTLHDE
VMPSLMSSLKEIVLRAEGDGRGLYEYWPFLGKVSERLQGRVRASALFDRL
ANGNYFLLGNQSEGGGVGRVAPGKHFVKIGEAYFFDNEQGNPKLEALVRR
LFPLFDVPFAVACELQERNYPVKQVTPALLRRQLRAASASFVSREIVSSP
ELGLDLLTYCLSDCHAGRVGEEGIRNCRERWRELASLPLLPLEDGSVGRI
NPSNRADVAYIVADDAQKSLFPNMRELFISSKAVQAMGKLVDEPDFLSVL
GLVKFSPEILASYVHTVLPSEWKSLVRVQVDWARAPYPLTPQWLHRFWQE
MPFSRAEELLAAWPLIPICNGTAAGSSPRRGGVELVTGSLAVHVLRLLPD
FYDNRLQEGLEDQAAAAATASAMTVGEMEDEWKVVRVPSDVSGVRSRHRG
HIHLHPRDICLDVKELEAFSRATKEAVEEGMVVTTTDRNGWQRRSSSISR
TPTPTAASVTHSLPSQDIVALEGEGGEREREGGGDLERETPIGLLVDYDT
DGLEAMVPVTQVVHGNDDDVEDAEVGPATSVAGDAGFELQTAVAAATAVA
VMTGPEHQKRLELLRLLSRARAPILEMAFFPKKVMADLLTTDNREVTRAV
ISCLHTFKEGLKLTENLSGVEQDHLLQRLTSSSQGGNVPLALTASEMEKL
RQLPLFETLAGTRIALLAGG
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Synonyms
Publications