jgi.p|Nanoce1779_2|626621, gene_1231 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626621
Unique Namegene_1231
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_1:27712..30101 -

Link to JBrowse

Properties
Property NameValue
TranscriptId626707
ProteinId626621
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_1supercontigscaffold_1:27712..30101 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL000ncniL000Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00530NO03G00530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626621mRNA_1231-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626621mRNA_1231Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626621

>mRNA_1231-protein ID=mRNA_1231-protein|Name=jgi.p|Nanoce1779_2|626621|organism=Nannochloropsis oceanica|type=polypeptide|length=527bp
MQVLSLQLITGAATRENEEKQIRKEENVFHATNEWQPIPRDASVPPGLHV
KLDLSTGERLGKLLDADETAQAAATGAAGTAVSTSSTFIPPNQNKSQNGG
GLLDSITIKNTPEEALDTASGPLPTRRETMLKVISNLPPVERASMGVDAL
LATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLI
QVLREGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLLVGRLGRGG
GKEVRWRAAWAVGNAVKNDRGFQGWVLERGKEGEGDSALTLLVEILREAA
EGGVEGEEREHGEELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLL
ASSPSSSSSSSGRRALRLKLVAFAHDMILEARQGQEATWEVEEARHPPSP
PPSLHASLLEGVTTPTWCQGALVLLEEVAREGGKGGGSTGAQAVETEKVV
EALGLLHGGCSGHGHWGGRDVVGRVVRRAREEVGRERWAEGVNPEYHQEL
LGMLEELAREVEGERGGEAGRERVEL*
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Synonyms
Publications