jgi.p|Nanoce1779_2|560972, gene_10724 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|560972
Unique Namegene_10724
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_58:95378..98246 +

Link to JBrowse

Properties
Property NameValue
TranscriptId561058
ProteinId560972
Product nameputative ubiquitin-activating enzyme
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:95378..98246 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0003824catalytic activity
GO:0008641ubiquitin-like modifier activating enzyme activity
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL081ncniL081Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00010NO11G00010Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560972mRNA_10724-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560972mRNA_10724Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|560972

>mRNA_10724-protein ID=mRNA_10724-protein|Name=jgi.p|Nanoce1779_2|560972|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp
MAPASSSSACKPIDDARTRVLGPALAQAMRASKLLVIGAGGIGCELLKNL
VLTGFEHIEIIDLDTIDVSNLNRQFLFRARHVGQPKAVVAREVVLGLNPR
AAETIVAHHANIKEPQFGLDYFQQFSIVLNALDNIDARRHVNRMCLATGK
PMIDAGTTGYVGQVNVIKKGEAACYECEEKATQKIYPICTIRSTPDKPVH
CVVWAKEAYKLVFGQQDASLLFEAPDAPEPSLYMAVVLARPPQGAGQEGA
VRYGVRVLEALFHHELEAKVAQGLYKSKQVQPAPVAVDSNSTSSTIPLDN
REETRKNGNPTGNGEADWTRQVWGPEACVLELLRVFAALYGDPARREHVG
AYEFDKDDLLAMRFVAAATNLRAASFGIRAQSFHDTKGIAGNIVPAIATT
NAMAAGLQVLEALKILRAALLPPSLPPSTIVDAACKVNYIVRAYAGRKRL
LLQPTALHPPNPACFVCNRSRIDLMLDTQTTTLAFLVNEILKAKLSFAHP
SVMIGGNILYEEGEDADEDLAALNLAKPLCTLPAGGIKHETIIEIDDMSQ
ELTLQVNVYHQDWAEWEGEPPPEGFLLGGGAKEAMAAAAAAAGLQKEMRE
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Synonyms
Publications