jgi.p|Nanoce1779_2|316633, gene_10075 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|316633
Unique Namegene_10075
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_46:49497..53522 +

Link to JBrowse

Properties
Property NameValue
TranscriptId316719
ProteinId316633
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_46supercontigscaffold_46:49497..53522 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL066ncniL066Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00160NO12G00160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|316633mRNA_10075-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|316633mRNA_10075Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|316633

>mRNA_10075-protein ID=mRNA_10075-protein|Name=jgi.p|Nanoce1779_2|316633|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp
MLNSMVRIGGVEEKYAQLPAFLSRARARVLVVLGRANSQDISLILNALSR
IGLSHAGQKQEEFVLTLLHQLLSAPHLNNSLTPQGVATIINAASKLLSSP
SSPATILKAHHLYRPLMLRACDLLQGMDSQGLSLTIAGLGKLSRGRSGTR
EPILSRFLAVSSPFLASFTPQHLSVSVHGISLFDRPPPTEYMERVQEAVL
PHLSSFTLQQLALTLHGMAKLGHHPGDLFLSAFLPAVQQRLAPPVPGRGG
GGGGGAKPSLPRPEPGNNLPQNLSLVLVALAVLQYIPSSSFWEAFTQALL
SLTNLPPPPPAAATAAAAAGGQAANQPSLPRSLRLIDVSSCLWALAALDF
PPSLPPTLLSALLGRLEALLEAGEEVELEAAKQLKQFALAVDLSHSPFPF
LPSSLPTWSSLRGLIETKAWLPHAQEEYCRSDEEGEDRDGIITSPIQLEV
EHVLRELGFPCKGEVHWGPFSLDLLVFPPPPHEGGATSSSPPSSSSSSKL
ALPLVLEVDGASHFFQNLNPRTPRGHTVLKRRILEGLVGKLWGGVVVLTT
EEWNVCESDNPALSYSPSDYTHNLQRDSEEEHVRKKMLLKEKVKEAFLGG
RR*
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Synonyms
Publications