Naga_100114g16, gene939 (gene) Nannochloropsis gaditana

Overview
NameNaga_100114g16
Unique Namegene939
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:873758..881574 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100114g16
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:873758..881574 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL052ngnoL052Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G02550NO03G02550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna976rna976-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna976rna976Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna976

>rna976-protein ID=rna976-protein|Name=rna976|organism=Nannochloropsis gaditana|type=polypeptide|length=2433bp
MDMSVKHIELATMGVADSKAVWTHVGQIALGVFIGVWGTKSREWAFAVMG
GMLAYFWCVSWMEPNLFISDGSAAAAADIPQTALDVLSGIVILAGTATGA
GLMLLWRSISIGVISGFLTLALLMLLVGGASFSGAAFTGPVVVLLACLAG
VGALLLAYRGNRMSKQRMNVIVTSAFGSLVLACSYDPWGARNFLLGDLAA
VSVLDWAAIGHCSLERGGCHPRVALGMWLVSTFFACLVQVYLGGDPELRQ
QVLALLRRDHHPYQSLPDAPTRRSDASKQEPAALPKHLRQDSNKFKLAEL
GVNILDLRHPVDAEEDGRSSSMDEEESKLSATLLCMFEEIQDVFGFQTHS
GVNQVEHLVLLLMNQKRYEDPAYRELMPAGKGPLSDEAVDAGPVKILHDK
LFKNYKRWCASLKVAPHFDTIPHSESRGTSASWNGSGLGSTGGKWFEREG
DKVKMHNLLLFLLIWGEAGNLRHMPECIAWLYHTTAACFKGSTLQTIEAV
EEEYFLTHAVTPIYAVVAVDMKKSRMDHVNKKNYDDFNEFFWSRQCLAYT
WTPEDMPAVQAARAKRAAGEHARPGGGETGLIARALKGSPKTFMEKRSWL
MIMLAFRRLIDFHVVTFFILAVQGFWLNLQWDDPYYYQLMSSVFMLMNSL
GIFWATLEIWATMQDIQSPCPPFEVREEAKHGVMLRLLTRFVFLLFQARY
FGLSLEADGLDLLPDERLSDKSVQLEAWWMYVWISVALHSVWILDCVFQA
CPPLSTQVFETRNHYVKALLDIIFPQMRTYTGKRVHEPFHKWCLYFLFWS
VVITAKICFSYQFEVSPLALPALELADDQVNYLNKNLYLTILLIIGRWLP
FVAIYLLDMIIVYSLVAGVVGFLVGLYERLGQVCDFAGIREHFMRTPESF
YSRLIYNSEDRRPKHSRKASHVSDLGMSRRFTSSRNNLLAAAQDDDERKP
LVATNTSGMQRLGNGIRSNYNGTSTQPHYEWMNCDEAFLDIGTTKWYAFA
TAWNKIVENLRETDIISNDERDMLLFYFFKGLSKSIYLPVFQTAGYVEKA
ARLCAEKGKEFRALPNDNVHDGDQSLKQKRDAIKSDKQRVDRELRELLNK
DRTAYEAVAETLELTLDFLRRMLGPKHAQDVLAATFTLESFQGSNRVMTV
ERAVEEGNGQGMGLILESLRLENVEKAVEALGKAVSALKSGLPRRVINPK
RVEPVKMAIPPRERGGMVTVGSSMRRVRSKGFMSNLSLSSQDLVAVGEQA
AEGAVHQSPAQPQVELDSLRDKIRDSLRIFLSTVKGIIVPGAPNYLLADV
ATAITNVLNGPFFWDDYYASEELDRLAESEAKSAVMPVLAKLQGLLTLHV
GDAEPKSAEARRRLSFFVNSLFMDVPKAPSISDMMSWTVITPFYSEDVLY
NRKDLEAANEDGVNTLLYLQTLYKSDWKNFQERLGLRNDSTSWAGKAKEE
IRLWASMRAQTLSRTVQGMMYYEDALHMLSVLDRDPSLMPNAESNSVQQL
IKRKFGYVVACQVYGKLKKEQDSKADDIDFLLRRFPSLRVAYIDERQSKS
GESSFFSVLIRANDAGTGIEEIYRVRLPGNPVLGEGKPENQNHAMIFSRG
EHVQAIDMNQEGYFEDAYKMRNFLQEFALTGSPDMPTTILGFREHIFTGA
VSSLANYMALQEYSFVTLGQRVLNRPLRMRLHYGHPDLFDKLFFMQNGGI
SKASKGINLSEDIFAGYNNLLRGGSVEFKEYVQVGKGRDVGMQQIYKFEA
KLSQGAAEQSISRDVYRMVNRVDFFRLLTYYFGGIGHYLSSVLTVAAIWL
LVYVLLSLSLFQHEKIGDRPMVPIGTLQIVLAGVGILQTMPLFCALLLER
GVWASLTELAQVFISGGPLYFVFHIRTRDYYYSQTILAGGAAYKATGRGF
VTQHASFAETFRYFAASHLYLGLEMVAALVLFACYTDAGQYVGRTWSLWF
AAVAFLYAPFWFNPMSFEWERVREDVETFVSWMCTTGGSTKNSWESWWKE
ENGWIKALGPTAKAYLVGRSCIWLVVAAGLLYKPLYLNRKFSGLNYLLFH
LGILLGLWQFYRFLDRRGRTRNLPLPYCCTRPTNIVIGMGIVFLVALIII
HSETIKFFVALYYLGAWITVVLSVLGFREQAKIFHWIHDWVLAVVLIIPI
FLCTILQFPRHIQTWLLYHNALSQGVVISDLIRHAQNSREMSNTDDERAQ
APRSHALASALLNTPSSVNLRSAYSPASGGPMQISPEEKTRERLVGSGGG
NGFDTTSGASCKRESFKSGQTRPDHSQSTSQRPHQDPSPVSPAASEQSPE
AWEVKLGFVSKVDVAGAERFWGLVHICTSFTADRQLSRAPAVLEIIICIF
LLRYLAACHYHLTHQGFRHIKGRQSCSLSYSRTWMADRVGYWETKTLPDV
DWRHYRDSAIETGEQSFLAKRKKKRSGTSPGLC
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Synonyms
Publications