Naga_100399g2, gene8620 (gene) Nannochloropsis gaditana

Overview
NameNaga_100399g2
Unique Namegene8620
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:401370..404241 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100399g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:401370..404241 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01470NO13G01470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8890rna8890-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8890rna8890Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8890

>rna8890-protein ID=rna8890-protein|Name=rna8890|organism=Nannochloropsis gaditana|type=polypeptide|length=310bp
MTDGSSNGTAGESVSAVLPLRRRVPPAARRRHDRRRPLPWRRGQAALSQS
LTTSDSSLIFPLSTTGGSHYVTLEIGTPPQAQAVIVDTGSAWVAFGCAPG
CDMYCGEHVHPFFAYNESSSARILKCGECSTQCLDDLCLVTQHYSEGSAW
RAFSVEDSVGFHTEPGTRQAPTNVPPTTVPFVFGCQTKLTGLFVPQLENG
IMGLSRGPENLVSHMRAAGRIPRAAFSLCFHEHPNDGGWMTVGTLDDATS
SSRASRDLGEGAAQDGGDQGGGNGLCLPDALPHRLVPGRASRPFPGGPHP
HRVGRSRFSR
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Synonyms
Publications