Naga_100231g12, gene8536 (gene) Nannochloropsis gaditana

Overview
NameNaga_100231g12
Unique Namegene8536
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:209059..213147 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100231g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:209059..213147 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL071ngnoL071Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02350NO13G02350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8805rna8805-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8805rna8805Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8805

>rna8805-protein ID=rna8805-protein|Name=rna8805|organism=Nannochloropsis gaditana|type=polypeptide|length=1362bp
MQDKTEMARKPAAGLEIDRFFLLVQTNIAEKRKLNPGYDVDLRGRFDILN
PNPRSWMLDLHKDIVDPVSELPDDCVSSGSPPNADFTITCESADALLEAL
KGKTEFTAAIAKRLIRVQGNFSKLSKLKDVLEPKECRSEAEEDDRAPMLV
PVPRSQWEPDGPQCSQCGAGFSLTTRRHHCRFCGALCCSDCTRYRLGTKH
KRACMLCHLAVQRARREYEESGGKMDSALYGAVPASPTAGTYGPDYGQDM
TERMLTLENRLGTLERARRVRKARTLLKCADWVIGSATASTLICGAFIGH
YLALFIRLRGWDVQAVELLQPSLRQTVDWLDLPASFGWSSRAPWAPLAYL
KQLYEIHPTSTESYWLTLSVTILVSVLLVSSTLYRRSATAFSVAAVLVVA
IELTKVRVGTRLATESEALWEEANYIYGAYLRLAFFRLKGSYIKMAQYIS
SRADIVPDAFSDELSALQDAVPPSPITAIRPMIEKALGSRLDEAFYTFES
EALASASIAQVHRARRKDGTDVVVKVQHPDVARLLSIDLRNIVVILTLIG
WIEPDYDFSMVAREWSKEVRKELDFKIEGDNLRMAYEGIAKKSGLDAVVP
QVLHASPDVLVMTYCEGVKVTDPRAFSDPETAAEDKALFMRTLCEVFAYG
CYVEGFFQGDPHAGNIHVQASTDTEGRRHFRPVVLDWGLAKQLSEHVRLG
NAKIVLSVWELDMGGMLDGMEEVGMPIDLVNVVEDLGNIRFMMRDTSPGA
EAREQSKQFMEDFVEKQKKKPKRERNPLKTMVPELLFLARVTEMLQGLGA
KLGVRVEYMHIMAASCKRALLERPRPPLPSPSDSSSPPVSFLDRKVRTLL
QDLLAEGHGVGVQVVLYKNGRMLVNAAEGLCSRLDPRPVTSSTLFCGFSL
TKAVLAILAHALVDEGVLSYDTLLTDVCPEHRDSGKDGITLRHILTHSAG
LEYAFPRNATPQSLWDPQTGIKAVQEAKPVGAIGKPSARVSMHYYSFGWL
LAPLLEAASGKSLRKLVHEKLLTPLGLEPQSESDPGGVVLGPVLGTEQLP
SSDDPRLATIEYDLRELVAELSGEGGGSTGADKGLMGMMEGMIDVRGSDK
GDEAAAFKDWQQKLTGREFLLDPRMLNGKRCRSSGSLPSLSGRFSARALA
DVLEALCRIERSTGNVAQQQFLTTASGAPVTLPFASGALASSPSKAGKVL
YTNSSANTRMGKPTFKSSSSSAPTPAGLSPASPPLTILSLARLEDMKANP
VDSEPGLTRIMGREHTVKLACGVQLFGFEAPAAMVAGGPEGAGNSPMEVV
RWGSAYGHAGACGQLALCDPSTGVVLVVTSNKAALPGQKNIGYEVLTLVT
EELNLGRPLPFW
back to top
Synonyms
Publications