Naga_100220g6, gene8502 (gene) Nannochloropsis gaditana

Overview
NameNaga_100220g6
Unique Namegene8502
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:122332..124125 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100220g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:122332..124125 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO:0016043cellular component organization
GO:0006950response to stress
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL071ngnoL071Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02730NO13G02730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8770rna8770-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8770rna8770Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8770

>rna8770-protein ID=rna8770-protein|Name=rna8770|organism=Nannochloropsis gaditana|type=polypeptide|length=532bp
MSLERVRITHEALNCCIAQALSTERQEVMSVLLGTWMADPATGEHVEAEV
VHVIVMARTDRRKDRVEVGYEQLAEAEELASALKNASGQDIRIIGWFHSH
PHITVLPSHVDIRTQAQYQAMDAGFFGLICAVFQDDLKQQSGRVALTAFQ
SVPAFAAARGGGGEGEGSSMARGLAQVENEPFLPFDAAAGEAGSGFVCKR
IPISLLPGSPLSPLWAWRGETSTSYSDRACDAMRCLVSLQEVLMREERYF
YECAVRANLRNNSQGGAGRGARDVSIRESSQGRIGAVHALHNAAIYSRAL
SSLLEESALPLANTLESVLLNLRREVRRVRRSTEGLEGDLPSERAPPTER
DEEGEARGGNGGEMMDVEGPYQQASLLGGNTARKDKAGASSSPPPPSPYS
ASILASSRPKILRRAAEGSFMQSLLQEEGLRGEVRVSLVREYPSGGGIDG
NISGFGEWALEVGKLRGRLTRLYESGGNMMSFGLAGARKGCEVQNERIVQ
LLGSDDLVSFWCRRVKPIVCPTATIYEQASPR
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Synonyms
Publications