Naga_100157g5, gene8485 (gene) Nannochloropsis gaditana

Overview
NameNaga_100157g5
Unique Namegene8485
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:79496..81287 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100157g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:79496..81287 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
GO:0016020membrane
GO:0009579thylakoid
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0006091generation of precursor metabolites and energy
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL071ngnoL071Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL070ngnoL070Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02860NO13G02860Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna8753rna8753-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna8753rna8753Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna8753

>rna8753-protein ID=rna8753-protein|Name=rna8753|organism=Nannochloropsis gaditana|type=polypeptide|length=226bp
MSHSLLPLFIQSTMRVAAALIATLATASAFLAPASLPSSSSFRRTQGRVS
MDISGIVGSDVEVPEFDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVG
YLVQGLYHLPDGPFEASKPIDALLKVSSERPLAAVQIAIAIAALEVLGAS
IQKYTAPGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATAGLAAQE
YVTGQGPVEQLLSGHISPFGDGQGAF
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Synonyms
Publications