ATS, gene5910 (gene) Nannochloropsis gaditana

Overview
NameATS
Unique Namegene5910
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002467.1:616061..618055 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100462g3
Gene biotypeprotein_coding
GeneATS
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:616061..618055 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL023ngnoL023Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G02380NO14G02380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna6118rna6118-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna6118rna6118Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna6118

>rna6118-protein ID=rna6118-protein|Name=rna6118|organism=Nannochloropsis gaditana|type=polypeptide|length=423bp
MFRVSLALLGLVATQTSAFVLPATRIARAPATSPTQLAATTMPADVKQQP
HGGKLVESMVEGAEAEAAKTRATQEIQLNDRQLCDVELIINGGFSPLTGF
MNEEEYKSVVETHRLPNGLLFGLPVVFDTDSEEVQPGASLLLKQGDRPIA
VFDVSAKYTPNKPLEALKCYGTSSLEHPGVQMIAMERGKYYLGGQLTGLN
LPVRDFNCKTPKEVRAGLPTGKDVVAFQCRNPVHRAHYELFTRALDAPNV
GKDGIVLVHPTCGPTQADDIPGIVRYRTYEVLKEETANPRIEWAYLPYSM
HMAGPREALQHMMIRKNYGCTHFIIGRDMAGSKSSVTGEDFYGAYDAQNF
AKSISKELGVDTVPSLDLVFTEEEGYVTAERAKEANLHIKKLSGTKFRQM
LRAGEDIPEWFAFKSVVQVLREN
back to top
Synonyms
Publications