Naga_100116g11, gene5592 (gene) Nannochloropsis gaditana

Overview
NameNaga_100116g11
Unique Namegene5592
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:849173..851576 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100116g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:849173..851576 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03070NO11G03070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5789rna5789-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5790rna5790-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5789rna5789Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5790rna5790Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5789

>rna5789-protein ID=rna5789-protein|Name=rna5789|organism=Nannochloropsis gaditana|type=polypeptide|length=505bp
MPLQHGCIQAYSPWCRVISSILLLGVLARVADGMVQNFHYEDETSPMFQL
ETFGFRPGGVMELNFNHFVVKVPEKTKDATVRAGFLMHLTESETTARQDL
EEALERLAADQEDCWLDHRGPNDEVIDLSDPESWAEKQVQHTVAPGEEGL
YSLIFVRCQPAPSAVSFKIHAKFYNPGPNYLSAGEAPLPTLYFVFFLCYL
VAMAAWVAVCRRRKEHVHRIHNMMLALLVFKTLSLLFEAVRFQAYQKHGL
TGHADGWAVVYYVFAFVKGIMRFVVILLIGTGWSLLKPYLSDREKKVVLV
VLALQVIDNTAMVVLDELSQTSPGSASWLTWRDIFHLIDIVCCCAILFPI
VWSIRHLRQAAAADGKMEHILRKLTLFRQFYLMVVAYIYFTRIVVFLVKA
TLPYDLLWLQAFFDEGATFLFYTVTGWKFCPADANPYLAVDTDERDAAEL
EEFGLDDYEDDLGEEEEDMREEGRDVGGIEMREGPGHGRHRGQPKPGGWN
SIVSV
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protein sequence of rna5790

>rna5790-protein ID=rna5790-protein|Name=rna5790|organism=Nannochloropsis gaditana|type=polypeptide|length=512bp
MVRGKGESLGQARGPLICLRTELVQNFDFVSRCTRRMFCFVRMRDRCKVQ
LSLALLTWPSPPGHPLVMELNFNHFVVKVPEKTKDATVRAGFLMHLTESE
TTARQDLEEALERLAADQEDCWLDHRGPNDEVIDLSDPESWAEKQVQHTV
APGEEGLYSLIFVRCQPAPSAVSFKIHAKFYNPGPNYLSAGEAPLPTLYF
VFFLCYLVAMAAWVAVCRRRKEHVHRIHNMMLALLVFKTLSLLFEAVRFQ
AYQKHGLTGHADGWAVVYYVFAFVKGIMRFVVILLIGTGWSLLKPYLSDR
EKKVVLVVLALQVIDNTAMVVLDELSQTSPGSASWLTWRDIFHLIDIVCC
CAILFPIVWSIRHLRQAAAADGKMEHILRKLTLFRQFYLMVVAYIYFTRI
VVFLVKATLPYDLLWLQAFFDEGATFLFYTVTGWKFCPADANPYLAVDTD
ERDAAELEEFGLDDYEDDLGEEEEDMREEGRDVGGIEMREGPGHGRHRGQ
PKPGGWNSIVSV
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Synonyms
Publications