Naga_100086g18, gene5549 (gene) Nannochloropsis gaditana

Overview
NameNaga_100086g18
Unique Namegene5549
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:740863..743740 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100086g18
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:740863..743740 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL020ngnoL020Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02660NO11G02660Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5744rna5744-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5744rna5744Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5744

>rna5744-protein ID=rna5744-protein|Name=rna5744|organism=Nannochloropsis gaditana|type=polypeptide|length=921bp
MSEFLFIRTTKICSQHCFRTLVPKRTVHSQDIGNIITMANLDSTLLDAIR
SKMSSVRVPGSYDKVYNDECMYSFDTPFSPDGIYVNLATWGGVGRDYLAF
DSHKTGSTLYVHLKYTKVPVPEDDQVQKKESESSLAPREDAAQSSPVCEE
KNTGPTVLGIGVEGGFPLDSQKVEVVKECALVVVNPGENGSCGKVETQSV
PLPNTALPEIVSRAARALIDHQGAGSQAEEATWLAEEDPRPVSKYADGLI
QLDNGVKVSSDPATWRCAESGQTQNLWLNLSDGYIGSGRAQVVNGETIGT
GAALRHFHDTHGLYPLAVKLGTITPHGADVYSYAPDEDGMVTDPKLAQHL
AHWGIDAMRLEKTDKSLAELEIEGQKWAFSRITEAGAHLRPLRGPGYVGL
KNLGNSCYMNSVLQLLFTLPEVQRQYLDHAYDLAEREAADAAGDAGFTTS
LEPKMFKTLMGKQHPEFSTGRQQDAAEYLEHVLERLLRAERGLGGKEGGQ
DWSVSTEDLFKYLVEERLQCVESGKVRYGSKSDLFLRLMIPVEAATNRDA
VLQHQAKHGVNKKQKLAADKSPPAGPAVEEGSAGQEEGASGLGGEEGNAA
EKEEEVFPIVPFAACFETFVRTEDVEDYFSTALGRKGLARKSVRFQTFPR
YLIVQLKRYYVDTQTWEGKKLEAVVDVPEVLDLRAWRGRGLQEGEETLPD
GKEGGEKGEAEGKTPSVDAGMAAQMECMGFSTHAIARALLAVGNAGVEQA
TAWLFEHLEDSDINEPLPSASATASSAPRAAEPDASAVNNLAAMMGFTEE
QAKAALQATEGSMERAADWLFSHADDLPRAVAEVLGAGGGEERGQEGGQT
PSQCNDGEGVYSLVGFISHVGRNLGSGHYVAHIKKEGEWAIFDDQKVAAS
EKPPKDLGYLYVYRRQDAMEE
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Synonyms
Publications