Naga_100122g6, gene5513 (gene) Nannochloropsis gaditana

Overview
NameNaga_100122g6
Unique Namegene5513
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:635126..638814 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100122g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:635126..638814 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02300NO11G02300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5706rna5706-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5707rna5707-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5706rna5706Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5707rna5707Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5706

>rna5706-protein ID=rna5706-protein|Name=rna5706|organism=Nannochloropsis gaditana|type=polypeptide|length=651bp
MSEEDHSPSYVARRRPRPPQHPPPPSGAPPLHSAAYRASRRGPTEAKIAT
KQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHR
TFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFA
SRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGS
MYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAV
KMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNP
ITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLP
SSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVS
TLPTPLEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGR
RTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVE
ATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRS
FERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNK
ANCVFQRGDVGAAKDLYLEALGVEAGCLEGESRGECFTSKTPCLVARGVV
L
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protein sequence of rna5707

>rna5707-protein ID=rna5707-protein|Name=rna5707|organism=Nannochloropsis gaditana|type=polypeptide|length=651bp
MSEEDHSPSYVARRRPRPPQHPPPPSGAPPLHSAAYRASRRGPTEAKIAT
KQSRKDAKVATPPLTAVSGAGYGRQVGPLIASAGDHKSQPDKPAFPSVHR
TFLPDPAVQSTGASKPSTVSLVPTQDDKPEAVARCLETQVHALLEASAFA
SRSGQLGLALNKAKEAQKKERALTRARESSNLVDAMNGELTYAVALHLGS
MYEGNGMEDEALHVYRGLLEQRALLPPVAGWARLNMGNVYYRKGRYAEAV
KMYRMTLDQIPSTSHKAMRLKVYRNIGYAFVRLQEWQEAVQALEIIVLNP
ITHLNGERAGTAGEDGMGGALVGSQGGGQGAGGNKAGLSRSQADPTIVLP
SSAAFSTSLLGSPRTVVFGDYFRTAYLLLMCYLVLGEVVKMKRAFAKMVS
TLPTPLEEDEDIEEEAAAEKEGGARQVCGPGGGVERDDEMELWEAAAGGR
RTRKRETENTARDAEEQVKPDFLREEMQRRRQEGVRYVLAAGKLLAPVVE
ATGGRDGYQWVVEALKRGNHGEVACLMELERASACVREKRFDPAVEILRS
FERKEIPVKAWAASSLSFVYFLEGELEKAEELANLAVEHNSYNASALVNK
ANCVFQRGDVGAAKDLYLEALGVEAGCLEGESRGECFTSKTPCLVARGVV
L
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Synonyms
Publications