Naga_100068g13, gene5486 (gene) Nannochloropsis gaditana

Overview
NameNaga_100068g13
Unique Namegene5486
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:555937..557932 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100068g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:555937..557932 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G02050NO11G02050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5678rna5678-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5678rna5678Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5678

>rna5678-protein ID=rna5678-protein|Name=rna5678|organism=Nannochloropsis gaditana|type=polypeptide|length=634bp
MALRGVLGSLPVLDHSVAFEVLPAKNVGLVMGMDVVARTGEEYICATTDW
WPPTKCDYGTCAWSDAPSGSNPSIPNLDLNKPLFKAAFDALSPFIWRLGG
SLQDDITYEEPGNPEVTCPPITNDPDAQWGFIGGCLTRARWTEIASFARD
HNAKLVFGLNGLHGRRHVKDREWTGSWDPTNAKSLMSYTKESGLPIHAWE
LGNELGGWNGIQAQLGAQEVGRDFVALRSIVTELWGSGEGSPLIVGPDTG
LDIPWFTDFLKAANGSLDAVAIHMYALGAGVDPTLAEKIMDPAHMATASK
TAQDLATLITNLAATSGEEVPQLWMGEDGGAYNSGRNGTTNRFTAGFWSL
NELGIFARAGFSVYCRQTLLGGNYGLLDKDTLQPNPDFFNYLLFKRLMGP
EVLDVQSSRREVTAYAHCTRRGIAGFPIFEAGAVTVLILNFMSDFDAEIG
TMTVTRDAQKDLLTGPRLEYTLTSGTPGELNSTFSNLNGQPLRVSETGIF
PAMLPLIIQREQTLTVPKQSYGFYVFPEARVQAWDGIYVEFCNIARNVLR
KGKRLGTSEWGKLFECTAYSERHPDRTRDYRILSMTRHGASMGQIKHRCV
YLDGMARWQVHSTKSDFVLLVGSLKAPSVRPNMK
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Synonyms
Publications