Naga_100049g4, gene5471 (gene) Nannochloropsis gaditana

Overview
NameNaga_100049g4
Unique Namegene5471
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:521076..525797 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100049g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:521076..525797 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01880NO11G01880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5663rna5663-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5663rna5663Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5663

>rna5663-protein ID=rna5663-protein|Name=rna5663|organism=Nannochloropsis gaditana|type=polypeptide|length=1573bp
MYSSLEQVLNPQIHDDDCHEVVVSDEETQTQFCFECAMDCFKSPNLLTIQ
KRRLLIGMSAGFTQLDRIDEAQGTETDRDEHGNSVDELSNSQKQATIELP
CKVVGDRIIRSYFEHVVLRCMNPIDDVDVIPILLKTTMQLFAHATLDEQT
VMALYEQLLHTCRANGIRESLHIIQLLSTMLENADNNGPILHFDHLLENI
EGEDIWHHNNGTNGHPSLSFATSLVAFVDLVAGDCFRDLCGASKDGKERF
ACNESGGRERQVQLLRLLLLLVRGPRTKALLLREGVMSRHMNRIQSLSNL
GQGSLGAATLIRSVEGAWIKAILALSVVLIPSPDPGPFTDITLDTTKLKT
RKRWLSQRNLEPLGRVAKSKETTAGLLPWHTTLASTLAKDLIISADLEVA
FGAGSYLLLLLSCLLHGPDKRGNELAEELIRIGLVEFCLEGIRNVLRFAV
SNGHQTQQQRNQEQGDKITLLLCRLMWTLSRAQPLGFYGSQRFSPSLFKE
LVELLQGLAENESLARVSRLSLEMEDPHELVSYEETESKDWLVMDASAPN
LVLSIIHASLTQTRVIYDEDLMGRLLQVLRHCQNKDNEEHPLNSQQDPTS
SFSSTFPLQLLLFLSEYLGAISNKLLFPSHPILESFLHCLKTQIIFFLCF
PICLPSYSKAGPTFMLTLALANLRVLDILSVRHYHHHQPRLPPSQPNLLS
LLLDAAMQLLVLFSGTERRSPGDEYAICHLYSKLLLLMSDAEEKCCTTEC
MGNDIDRDSHRLSQLLLDTGVFEMAIQHISYLEEGENVEEKNVDVFSQIA
ARLLTDVSDKSEGLDPCHLTRFVRQNLRTLHFATLSDEVAEIWLWLLAQD
LHCLCRWEAEYLVNGCSRFELLLLISRRVWRKRRPHVIVPGEEISKLLIS
WGKQAQQAREEAYLGRILTPLSIKLILDLALGGSSVPRLAPEVRAGLQTV
LQAFCVRENKGVDTFCSIYLSCHGPSHLHSCLALADATGVQFIVHRWMDQ
LVEDKLNVEISEGSNGPSLFARVLHTYFNTGAGDGRSVLLALLQYMKAAS
SHRPTPRLAQALTYLYTASCWSQLWASCADTCSETLQILHDMILPVLVDG
SSILEGQTALRLTNVTKEENQIMPDVQTLAVQVIQIVKAALQHAAWSADF
TPVLKTTSRILLLATAPPLKNPHVGAALLALINDITRRGHDEFLNQCAGI
LDLAWSFESASPRLATTNALLYCLLLLHHRCTRTQAQLQGLRGEHQTNVQ
VRADADSFKPSWLSHAFFRIDFLETCIQPDNDDEPTQERRRVALALLCLM
MTRENRTFPTLSPSKLQGEKWEVSKDSAFRKGSTKFRKMRLNVQACLLDS
DARVRECAMALLLQLWDYASPTAWDIFLLQSPPVISSLASGTSSYAPLFV
AACLLSGETSIHNVICNPLGNETFLVDHLVARVQAVIHGVRAGERDSLPA
YYPSLLYFFQALTLTGHIKHEQQLTLQRILKPSSLKNDGRSGNKSDTQWM
LAVDDARLVDYDESACQEQDLVDVVKYMDYSDPHDRLRITTTEGLRCGST
CAYPTHPREVDLKKVVETLQTMK
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Synonyms
Publications