Naga_100049g19, gene5457 (gene) Nannochloropsis gaditana

Overview
NameNaga_100049g19
Unique Namegene5457
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:478459..483501 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100049g19
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:478459..483501 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01740NO11G01740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5647rna5647-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5647rna5647Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5647

>rna5647-protein ID=rna5647-protein|Name=rna5647|organism=Nannochloropsis gaditana|type=polypeptide|length=965bp
MGELEERRFVLGRLQTLAGEGGEGGREREMEEDGEREDGEREDGEWEDGE
EPLYISEPVLVRHLFPAAKARARWFSQEAVEVNFLLTPQQLADTAESEQI
RRLRYKRFYYREDAVRRTAESVHGAATFQRLRLAAVTQYESSLCEEILKR
WRESRGGGRAIGRGGDERLPESASVEADEAGLWHRIILIKELGKGQYFET
TGEIGQVGWRGGLWEEWRVAGQQGRAGEVEAGNEYDPETRIRAPNRLLAA
LGAHRLLSNLVAAEEKQEVGPLPMLCVQTSSSIAPSPECLAVRAGADFRT
VADGLGDVLLLPDLRKFVSRVEPAASRQDILDIVRGAATAAYAAGRMAAL
KPPVPRTGVSTGKRKRSVEYKQGHEDEVENIANGSTAAGLVGSDVATEKL
TVAVAIKLMPWPLSVPLKANALPLGSLSLTLEQALAPLESMLESHFLQMS
VNGEADVSSPRVPCLPGGVELALKGETGTKTAFVLIHPLLAEELLSIFTE
ETARKMLTGELQGGSLLSSIGESLQGGNMRGTPGIIAASVARQGGNGKKT
SKSTPVHGLMTSLKSLGESRAYALNRRLVTAEHILAAVRAPPFGEHSSSH
GAGRDFVTRTAVESFVSIERTPREDPYQMRHRFGCGTGPCLDSTSCRVCK
LCLPRHCGCELTKGALPNQMAPRVAKEQALFSKSLLQQEREWRDEQQQQH
YNGGGKDLSSVNGSKTCGGNQKEAADFPRKIRGTLPFSIFPDLRREENLR
RGSDGRTLRRIGQAVVEDAVERECNKHSPRSPLPFRELLLFLRERAAQKV
ILSIKNKADMLQMATVEGHKTNEHDEQKIDDNDPTVVVGQLDESALIAVG
VIVEEAVESMVQNILERALAEDWNKLYRGIREATEEDVRETLHTHLRQQG
SGSESTELTEMLITSSARKDEEDDMHWAIFGHSRHDEKQDQKDINKKVER
EMKRFRRNTSKSKER
back to top
Synonyms
Publications