Naga_100098g21, gene5436 (gene) Nannochloropsis gaditana

Overview
NameNaga_100098g21
Unique Namegene5436
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:431569..434595 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100098g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:431569..434595 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL019ngnoL019Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01530NO11G01530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5624rna5624-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5624rna5624Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5624

>rna5624-protein ID=rna5624-protein|Name=rna5624|organism=Nannochloropsis gaditana|type=polypeptide|length=596bp
MHVHVLRPKLRQLSALLLVGFCSAFSFYSSSSLTSRSTFSHGCTNTYAHL
SKNGGRPASTNSLPSPPFVQGRLSPKIASRRPRLPGPLYSSRRGGKSGPF
MTRRHASPEDPESDVHGKYGGYASDSEEETSWSWPESAEYYEYVYERQYE
AGIGFPFPVEGENRTWKEKSRRGFHLHIGAGRLGLGLVIPAVARSATPLG
ILQRPSEAWAPLMDTKRMDVMVNEETAVKDMIVVRDLTELPDWDERRPNL
FVLSEDPILLQTLVRTATSFSMSLGPFMKDVVPLLSTLPLHGEAEDPADF
VLPVLYAAENDHKMVEEVAEALAGRVEVRKVMVDRICTAREIGELRVEVA
CEPYEGEMVVMAESLGKHGLHQGGETPRLPAPFKGNHVRLPSKQEQAEYF
TQRKFLLVNGSHTTLAFLTLCLRQPPAPKKSAAGHEGPETYTPPADHELI
NWSNCGEQLHQEIWAWAVARLLILLTAFPATVLMEAHDVTTEDALCEVLL
AYAEETLQRFASTTDSTARVLQGGVANRWETRLKTVDRFLQPKTKLRKLK
AKLVEKAGLSFPYIKQVVARLCEDSHRFTGLELERNEGLVKEDLVV
back to top
Synonyms
Publications