Naga_100310g4, gene542 (gene) Nannochloropsis gaditana

Overview
NameNaga_100310g4
Unique Namegene542
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1391236..1394403 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100310g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1391236..1394403 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL003ngnoL003Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05150NO02G05150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna563rna563-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna563rna563Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna563

>rna563-protein ID=rna563-protein|Name=rna563|organism=Nannochloropsis gaditana|type=polypeptide|length=866bp
MTDDVHRPSPGALQSLIYTPRSPQSEQPSLEVLDQLLLPNKKAYIPVKTT
QDAWKVIRDMNVRGAPLIAIVAVLSLAVEMSAKSNVQGKDGFASLQTAAA
WLQKAVVYLKTSRPTAVNLFTAMDEVLLLSQATTKKHDAVGACVQNAAPL
VSAVVRFAEQMLKEDVESNQAIGDHGAAAILANLLPGQGVKVLTHCNTGS
LATAGYGTALGVIRSLHKEGRLARVFCTETRPYNQGARLTAFELVQDQLP
GTLITDSMVSFLMATQGLDAIVVGADRIAANGDTANKIGTYQLAVTAKHH
GVAFYVAAPFTSFDLSLASGDQIEIEERPARELTQVQGIQVAPQEIAVWN
PGFDVTPASLITGIITEKGVIHPFPSAGATDAKPRVPTQETGEDRRKSNG
TVGHGRRMTFDIPGFLNGEGAHQIPSSLPDAAAPTPSMELDSANLPSPSS
GYKALSEENVALFLEKHVRDVWDLLGARTGAEVEISEVGDGNLNLVFIVR
GPKNTVVVKQALPYVRCVGESWPLTLDRAFYEAAALQEEGRHTPRLVPEV
YYSNRALALIVMQFVPPPHIILRKALIRGDVLSTLAADLSDFMARNLFFT
SSFHHSGPSKREAVAFWSGNHGLCALTEAVVFTEPYCPEVAHNRWTSPAL
DETVAQLRQDQALKVAVGKLKAKFMDSTEALCHGDLHTGSVMVKEGSTVV
IDPEFAFYGPMGFECGALLANFWLNYFSQAGRASDGGGRHEYAEWVLDTS
VAIWQEFCAKFLALWADAATHQGEGFKRVAYAKPEELRAAQEAFVQDLLR
DTLGFAGCKMIRRIIGIAHVEDFESIPDPQVRAACEKRALSMARTLVVHG
GEYASMEAVAALARKA
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Synonyms
Publications