Naga_100016g24, gene5394 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g24
Unique Namegene5394
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:337371..340868 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g24
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:337371..340868 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0009058biosynthetic process
GO:0006810transport
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0000166nucleotide binding
GO:0005215transporter activity
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL019ngnoL019Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01140NO11G01140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5582rna5582-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5582rna5582Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5582

>rna5582-protein ID=rna5582-protein|Name=rna5582|organism=Nannochloropsis gaditana|type=polypeptide|length=666bp
MSEAAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVQVEKGRPRLVL
EVAQHIGERVVRTIAMDATEGLVRGQPVKDQGDAIQVPVGPGTLGRIVNV
IGEPIDEKGPIKAAAHWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYS
KGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLY
HEMMTSGVIKIDKNTGSTEGSKAALVYGQMNEPPGARARVALTGLTIAEY
FRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTL
QERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAEL
GIYPAVDPLDSSSRLMDPEYVSMEHYKTTRDTQKLLQDYKSLQDIIAILG
MDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFT
EILRGTYDDIPEQAFYMVGNIKDVQEKATKLAKSLEKETKSSAAAAAAAL
QYSLGGQADMLSKGMEQYGIKNDKSASQLQAEIEPFTVPPSLISGFDSVP
GVGSELSEAEIKEKFTEAYKALTPEQQAEAKNYAKAFLSKDWKQYIDPSV
EHSASADKDEWPWAGPDPLPEKYLKQDIPEEWMVEPPKEWWLVKHPKWVA
KFGKDYAEKYVPANYR
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Synonyms
Publications