Naga_100016g52, gene5369 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g52
Unique Namegene5369
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:279161..281470 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g52
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:279161..281470 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00880NO11G00880Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5556rna5556-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5556rna5556Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5556

>rna5556-protein ID=rna5556-protein|Name=rna5556|organism=Nannochloropsis gaditana|type=polypeptide|length=588bp
MPKRQGRSDGAMLKAKSNSKRGRDGSVTTDNEEHVRDSHAKGVVRRPRAI
HAQSETSRVESESKDLGHGDDLDPVTLARPSRAAASTAKARIGKTFEYRG
TGGNAIAEKVHTNGEKKESKPEKAAARQSGSLREAPHRLELVADRHSKGA
LLDALIRIKPPDVLMKAFKWSSRNDKYFALTVFSAKGNRILPELLKEVPL
RYRIASVGARRSNETTSKETGEEEVLYDEAGKATHGGMYYFRVPQFKIPG
CYSISFQLQGPAAFNKLDPVSQIVTVVPADALEHTDPFPPRAQENEAMAL
PTGTLRSLRSQRQGAEGSASNAAVGRGSTRDPALGGGGNARVQHSLEKHL
AASVKEDTDSMLTFDELWLKGQLLTLVIPGALRQQLCEDWFAITRRRCVV
GALPRHDGKKNIRLGKQTSNPQWPSVGEVVRMYERSIPAASLGDFKGLGA
RLCTLFDGALGNVLLYRFEMDQYLSLLELGGKSKLPHQIWGAEHLLRLLA
IAPRLLGIQKSTSNKKRVDEESSDTLMNSEAPVGMEVERPGSREIEVART
YLQGLLDFLETEQASLFASYVEPPGKFGLDVPRNFRPS
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Synonyms
Publications