TOP6B, gene5140 (gene) Nannochloropsis gaditana

Overview
NameTOP6B
Unique Namegene5140
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:704058..707346 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g117
Gene biotypeprotein_coding
GeneTOP6B
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:704058..707346 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL017ngnoL017Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01350NO10G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5320rna5320-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5320rna5320Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5320

>rna5320-protein ID=rna5320-protein|Name=rna5320|organism=Nannochloropsis gaditana|type=polypeptide|length=742bp
MDPSVVVSNSIRSSMGSTAWSVSSWLSSFNNGGRGHDPAVSPSRTPPRGV
GKGRAPPCRPHHSHHLPSKCCERGGCGKRSNGCKYSSPSRPRPGPKLLCR
YGMGCTHVSDPVHAEQFWHPPVPGEPVCMTLEDRNGGYAAEAKGGENLFS
ESSFAVTRSYPCHECGLCFRDLSVLRLHLQRKTAWSNQSLVGCRVSCLVD
HREWQEGLVVEYREAAGKHRIVFEHVGESRWLSMLRTAFFIIRRPAAPPP
CRSQRSSSSSLAPFDPFLPHSAGSVPESKDVDARERQKDRSAPSLALAQS
ERVGHWTYVEEISLGYARAQAIMHRAYGNRIQETGHKTRGHLCVTETDRV
LAQDAQSSLLYGELLPRGINKALGDMRLRGSEAEVVFELGMGIGKVAMQV
FLQLTGQTVTEIETEGAWGEGLEDGDPRRGGRLRRVYGVELSSARFFIAE
AAAHRLCREYPRDFGIQAWERGQRIVVEKMGSGAVLEMEVGNLLAVRGLD
RADIVLLETDLGAGVHPELCALLRSMKSGARAFTYLDLRSIWGAEGGVEG
EVEAGTFPFRQLEINRSVSDRYATSWSVNRGHHFYLWMKVLESGSDVLMV
PEGHPEPSEWVPDAWAGAGRERGRGRGRTVGPRGVTIDGQGQHGRVMPSS
RSHSQDRRHHASDTVSQDGPLSHSPTFPRNRPLASSPPAFSPCRFPAQEM
PRKEAPLRRNQGKGGGGSAHKSVFVTWGKAVRRLVGRGGGGQ
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Synonyms
Publications