Naga_100115g20, gene513 (gene) Nannochloropsis gaditana

Overview
NameNaga_100115g20
Unique Namegene513
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1329951..1333594 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100115g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1329951..1333594 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL003ngnoL003Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05330NO02G05330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna531rna531-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna531rna531Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna531

>rna531-protein ID=rna531-protein|Name=rna531|organism=Nannochloropsis gaditana|type=polypeptide|length=957bp
MAVGVAAAIPDNRKLSKKEHDLFRSIVKFYETKQYKKGLKAADSILRKYP
SHGETQAMKGLILNCMERKEEAYELVKQGLRNDVRSHVCWHVFGLLHRSD
RNHGEAIKCYLNALRIDTSNMQILKDLANLQVQMRDLDGFVETRRKILSE
NCKLKVHWIGFVLANHLSGDLGMALSVIDSFLGTLEKRERGFEEGELVLY
KAMLLEQAGRKEEALSWLESQKSFVMDGLAWRTRRAHLLLASEQFEKALE
AYRALLAENSENYEYHLGWQCALLRRDSSNSAAMFAQPQASLPSSAAGDL
DEAASQQLLAAYGELARAEPHSLVCEKVPLTFLEGEAFKTRVDAYMRRHL
ARGLPALGSELAALFRTEDPENGRRIQAKDAYDLRKNKRFQIVQLLVDEY
IETLAMTGAFPSPTTSVAPCQNGSHPPSSSPSPSTSQAFDVTTTLLWAKY
LKVQLLESAGEIPEALKLLEECLAACGEDTGAKLDFLQRRARLLKKGGRV
TDAAVVMDEARQLDLSDRYLNNQTTKYLLRAGQVEAAQNVIALFAKHEGD
PQVYLTDMQCMWYELEWAHATFSEATKPSGGGRALIAKALKRYVAVEKHF
ADFVEDQFDFHNYCVRKMTLRAYVDVLRLEDGLLAHPYYLAAARGMLDCY
MAVLEMPKEEEGVEGKDAYAGMTAAEKKKEKAKARKAAKKLEAEAAEKAA
AEKATRVANAGGAGGGKEGEEEGKGKSTTNKKGGDGGKGVVDEDPEGMKL
IEREPLTEMKRVVAYLTRHAGKVVETHMLAYDVACKRGKALLALQALIRA
HALRPMHPDVFRRTVHFWTGMGESGGEGGKQEWIASLHPTSAAVIDAEKQ
RLLGEKKNLGSYVTEYVEKARAWSSLPHVLAAARGVALAKTEPGATEVAI
GLIREELQKGQCRGLTVKGLRQVVEVVGKELDAGSATVAEMKKLCHQYFP
DALEFSC
back to top
Synonyms
Publications