Naga_100005g69, gene5098 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g69
Unique Namegene5098
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:599242..605257 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g69
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:599242..605257 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL012ngnoL012Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02050NO10G02050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5278rna5278-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5278rna5278Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5278

>rna5278-protein ID=rna5278-protein|Name=rna5278|organism=Nannochloropsis gaditana|type=polypeptide|length=1863bp
MWYDQSNHGDCEKKDFPGVDDLHELSLSEALSAAGDLLSHEETRLPAAFA
LLERLKLSATENGAAQGVDKILRLLGRNLGYHPAVLEQVLEALSLGENSG
PIIEALPLLVVGAAPAEVARVVEAMKSALQDDMAGLLLPVLGALFDLPLG
PRLRREALALAEEALAVVKDADVPVIVRTLLRSLDDHSDPAVLGQIRREC
ANLSPQAMAVLMEVLSSTLATSPRVARLLLMSIRSCAGAKSVLLGRQRQE
LQQHISIVDALTLVLLLPHPSHRPVAQETLLRALAASPPIQAESGGQRRG
RPASRGRCLASHLCAIVELTVDKLWQAVASTLAEMSQWLLLSALLPPPCP
SPGLEAGRQARALATHLLRRLFQLHVGLRDEILGFLMTLFLACGRGVAAG
LELPGGAGCRGGRGGGQRTSELLELMRASHSIIVGLAQDSSQLLVPYAGM
LCDQLLNSAFEIPVPLMAPLLRSLSLLARSHAASGIEITLFIYIQKHLWT
NSVTHAGTGARGGSLRPRAQSSGHGDVPWVVDSADSDDGRKLTSLILAEA
LVSLEKGAAGQGQEVPAGSDDLSGVLDWVVSSLPVAAPKIAAFGLRFLLR
VLRGTSSKSLGDSDTRMKVLRRQVEDATLSIACRLGIIQRSEDVKNLNSK
RLSYLVSDNLEGLSLGNNALPWRAKFLGPAAASGSSPLARKGVLSALTRS
DQETDHGRDERGVVTWAWCLEGLVDDFVPRIAAAEAVGLGQLLLIRTTVA
ALCELQLQVYAGAKEKTRCFERLAAAPMLLPPWPDVVGRRPAGEGLEREE
PVLPWAATDEQEPGWEEDTRLWRVKARVATRRGRSGRRRKAKKAKVCSTD
SVAGHHRRDSGGEEEEEGDDEEDVFRDRLGRRDRWLRAGWGALFGLLVTG
ALIESWTRGRKGQEAWSEQVSESALLALLRRHVDLFQRVRRCLERVSPTA
CGNETLRDVTQAAATEPIRVTRGRQQLERAMAAYGETALGPIQLQDELLA
ALLDWTSDALQGMCHRKDMLEYDGEMAEDFGVSVGDERLAALLGCVRCVM
ETVINRDDLAVAVEGVSSPEESEDGGWDIPHDHQLAQQPLRFDALKVCNV
QRMTSQISALNVLLRKVRVHYGLIRGDAAASRALEPADISDLLCMYLGYV
RSLCIHLRDQEHWEVNACRTPECRIKNEVSETAPCSLASSSVQDNQNQLP
VLSTENMARLFAPNHDGGGCEGGQLSEDESREQAFEFLRTEMRIAEDEGV
ACGLLELLACLTAGTRKAGVAACFTALTCLETAYPVINPDPREIRGLEMG
LGSISRGCSTESSLPFALLHLLRPQLGRHEVQTRVLLDVRKAALSPTSPL
AHRPVLRHFLLTFWSLLPQDRRAAGLVRLCEGMEAVNREESSALEELSVR
ETGERRRTRFPGNQHRSGTGQMSSSSYLEERELALRVLRGVSPEEIPAVL
ELLLLLALATLLLARPQSAPRFPHEGSEMMPSHNPYGDVRAALMALGHVI
QLVGSGRAGTIEGGRRSVRLSACTVKTACLALGGLQWQIERCLDWRTARG
GPREVETADEAAQEQGRQQETSLDHVQALIEDGLSFVALVADASRAMKEK
QDMAPESSSGRSSATRRRKRDRCPLDHPAGRRWEGLTANSFDHRFVARCV
LACEKLVEALRDVVTLLRLPIKIEGLPTISGQSLKKTSRAQGKKRIPESH
LFGGKMKRSMLQDFAEAERESEGNDCTDSNATTRYMRSRGAVGRRGEWER
LCPSSDDEDGSVESEDDEETDEMKEDEEQFYALISGSREDGCWAYSDDVS
GWGDSRAEDVEDEEEDDSSTVLGRSRRKVFSSTSKVVVCGGSSAQVRGSE
DATLVVRFESGKK
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Synonyms
Publications