Naga_100032g44, gene5009 (gene) Nannochloropsis gaditana

Overview
NameNaga_100032g44
Unique Namegene5009
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:375069..378259 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100032g44
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:375069..378259 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02800NO10G02800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5189rna5189-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5189rna5189Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5189

>rna5189-protein ID=rna5189-protein|Name=rna5189|organism=Nannochloropsis gaditana|type=polypeptide|length=997bp
MPDGAGRAAAAKNEGNSDVKDLDVEPTAENIAMSPGDAARGTPDAPGEET
GSTASAPSPEMSSAVEAEFPAPMEVDEAVLPSESQGSANGGVPDSVQAEA
GAGPDASRPAPLLPAVSAQVPPPPPAASDTGEGLTFRVLYGVLEHEPLCY
LLKVGEATLLLDCGWDVQLDEALLEPLLPVLPQVQLVLLSFPDLSHMGAL
PWVAKHLRPGVPIYTTQPVFKMAQMVLYDLYLNKCMDTASGAAGCPAFTL
DEVDAAMARFQLLKFSQPLEVRQQGRFYLSVTPYPAGRILGGCFWRVNYK
KMEEIVYAVDFNLKSERHLTGAVEAFNALSADKEQRPCLFITDARPSPNL
STDERKVETEFLAAATGTLRKGGHVLIPVETSGRAQELLLALNGHWRSDR
LLWGYKIVLLHHMARNVLHFTKSMVEYMHPEVIRDFDRSLRNPFSLKHVV
PAQSMLELEAAMGEYRNPVVVLASDEGMDTGFSRALATRWASGPENALLL
CGHLRKGSLAESFWKLRHLPKAALSFSVPVIERIVGEELAGLREKEDRER
RKALEAEEFRRQAHELMEGTVGAVFSEEQGMLAGNSSNGPLAPLQASSSA
KRLRKTAAMYRRPRYLVFGCRDPASVEVDAYGEPLREGECVDEGNAGGGP
QAGTARGLVFQGPGAGGGGGGVQRWGYLDDVLMTEGEAQVRAGTGALKFL
MRESVVEVRWRVRAFPMEGRSDGKNLRAILTNLAPRNIIFVRGTPESFTD
LTLHAGKMLGPSTRLWTPPGPGKGGQEEQLGELVGVLDGLVGGSAAEGAM
AASVAAAAAAAATEAARTVGIRFDSKVTDVSLEEDEGEEEWREEAAPLVL
KEMGNYRLALVQAVASEDRVDANGKPLLRCQPVVATKGGTVLQDKGSEEV
SDGAETAFSVLSQTRAPLWLADGDVFLTESSQRQSLRQKLREAGVNPDFH
VGPEGASLICDGTTVVRVKDNKVMLEGPLSETYFKVRQAIYSRFVAL
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Synonyms
Publications