Naga_100251g1, gene4893 (gene) Nannochloropsis gaditana

Overview
NameNaga_100251g1
Unique Namegene4893
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:24411..30471 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100251g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:24411..30471 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009056catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL016ngnoL016Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G04070NO10G04070Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5069rna5069-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5069rna5069Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5069

>rna5069-protein ID=rna5069-protein|Name=rna5069|organism=Nannochloropsis gaditana|type=polypeptide|length=860bp
MVKTRDSFFPPFVLGTLERLDQARVAVTSLFAPQPANAAGTPTSPGTSPS
SSDEPQEELERMVFARRAAARRREEEKRKEEEAEALEEDGGDNVFSDPAS
GKGAEGMEGRDGEGKAPVLAVSASPSTSTRDVPRLSPREMAFDGREQDWY
LARASEKMAPISPTSPPIPSYWEDKAGEEGEKGTSLASAAHLASLERGMA
SSFLTLLAHAQTRKHFKLLLQDAGGLGFLVRGLTITSPPNPDRAQALETL
CRLLRPRTKAPPGASTSPSFGASSFSGKGGDVEEGNDRGRTPYDSDGEGE
WGESEDEPNEESSPGGVVMAALTEDKDMELALIRVLLSLVEEPLGISVSR
LTGLGRSHSSIEELRCQRAAIYLLYTMCLASERAIEALQTEGRLIPALQQ
ILRERLFEEGPMSVYHTIHKLLSIVGYHEWKPRQAGQKGLRILSLDGGGT
RGVMTIALLSHLIEATGKEVHELFDIICGNSTGGILAALFAVKATKVKEA
GRLYDELIKKIFNKSPAPLAYSNLVLRTAQYNENVWEDVLKVLIGETLLI
DTMGGPQGLNTPKFFVLSSVLSCNPAKLFMWRNYNYRRAQRSRYEGDFRA
KVREAIRATTAAPTYFYPLVRGGMVHSDGALLANNPTAIAIHEAKIIYPN
VPIEAVVSVGTGNVLEPQPVEGFGWAPIFNQIINSATNTEAVHDSLADFL
PQDRYYRFNPNIENVSIDEIRPEKLAYLKATAKEYFQDPRNKERLDQLIK
LLQPKKSTRSPLASTSSGPSSSPSSSPTAASSRAQSTPTEGRKSSTATTS
RAMSSKKASSLSASPKSPPNGTPSSSSSTYLPSSTSSSTPSSFGKTTRSS
QSSNPRTAAV
back to top
Synonyms
Publications