Naga_100333g4, gene4808 (gene) Nannochloropsis gaditana

Overview
NameNaga_100333g4
Unique Namegene4808
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:825446..829344 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100333g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:825446..829344 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03360NO12G03360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4979rna4979-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4979rna4979Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4979

>rna4979-protein ID=rna4979-protein|Name=rna4979|organism=Nannochloropsis gaditana|type=polypeptide|length=1029bp
MRRSAYYYNNLDKLSHRGKSSGPGRAVKDNLLPSSQAAPASTAAVASTSA
PRPPIHFELTKGVAGSRKTQHAVSAAFQAGSTGAMKNILFLVKVGSNAQE
IRSRLETQMGLEFKRHKLTNHFVARDNRSPMPDAEVVDGGERERGRGRGV
TRRISAGATASYWVASFDAFVDCQLRTHPSMQEKLKTRGANFEWKRDALL
RLIRAGAHGGFCLKDGALADFVVVDEAQDLREEDMEIVSRLVESEHARDG
ALRRVLVVGDVEQTVFSDVLTGRGQGHPMDCLHRWMPSVPVHTRRLDINY
RCPHAHVSFNNLSVPRNATRGEGLVRPSPEMAERAVGGQDKPYLFTYVQS
SSSVQNYDAYRTACRIAEIVLTLLRTMEGLRLRDIAITSRFVNVNLILLQ
LEDVLERALAEAGYAPSDGSGCVHLFRTKVTDRKSINWEEAGERLVMGSL
TAFKGKDWRAVILLDCTEGVLPSKSSVHTQKELVDRSLFNVGTTRSKEVL
LIGFDAKAPSRYLSHVHERLHEGAQLEWEASTIETAGPYAAIYATRRNDS
KSLAEGVVEWKEGRNRTVDVPFKYYWSVTDSTDEIQTVDDMLLGEESGGE
DGAEEEEGPYAWKGFDRFGTRLSPPAWFKQDETGRLITGVMGEALLAREL
HVKGRLSKRADATLLWPVVEKLGGRAGGRKGRPVVFTECPKVLNLAVDYH
LNELWAYDETEQWRQALEMLLEDHGHEAGASRAFFLELLEGMPRCVLHAA
YRGPIQTFAPLLDYRIPSAELPVEAVWNCAVLYQDALSYGLRQPSLVKRL
LEVEDCRTPKDLSKLLAGLSENVIAYLDFKQARNSTTFAQGNGVSLLQKE
VAETELEKRGFCRQRDAHVFAEGWTYGLNGRIDFYDENRKRIVEVKVSDT
DGVLPSHEVQTLLYALLYGNGWKPTRAFEIVNLLKGMRYKRVLRRKVKLW
NCLRRAFKKLDFDDEMIETLGRAYGPQYWEKRDEEEGSGPEKGLIEESID
IDSKISRDIDCEAVQDLQPRKVKVLQEAS
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Synonyms
Publications