Naga_100176g13, gene4732 (gene) Nannochloropsis gaditana

Overview
NameNaga_100176g13
Unique Namegene4732
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:621582..625380 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100176g13
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:621582..625380 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02460NO12G02460Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4899rna4899-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4899rna4899Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4899

>rna4899-protein ID=rna4899-protein|Name=rna4899|organism=Nannochloropsis gaditana|type=polypeptide|length=1063bp
MPGIPDPQTAFAVSGQAILLTLSGGTVIFLLAVLGFSVIHRFNLFPRTYS
PRWYLHPNRTPMVIDRYPRFLFSWVKEIYAIPEDEILRTVGLDALVFLRT
QRLYALLFLLCSIFGLGVLLPLNFKYGNPATNDSQFALTTMANLPPRNRI
GNMHVYRTNIAAAWLFTAFTVGLLWLEYRSYIALRFKWLTLPRTHNYSVM
VTHIPAKMRNVAVLKAFFDRLLAPHGPQLGESIGKVLSVTLTMNLARLEA
LVTERSHVHRRLEHTIALYGRPDSRFWRCLHRCLGRSSQQWRQDLLHDVR
LLSERLQTLNEVVECAQQEVRRLYYGYNDPSNFGLLDVEVMPSHTGGTVG
AADSVVRGGGSSSEGHNELSVEEGSACPKQDPAPLTPRSDLLPSNRLAPP
SPPVDAIRPASFPARQLSTLAQPHDGNGAGGGALPLFSSAPRPVSPAARE
RSPERQGPARLQEGDLLATVEGDGECARGSGEEGKNELDESAIDIDGIDL
PGGPFHLQPSGGPTHRSSPARTAPAEGEDKREEGEVEDELGLAGMGIAMG
PNGAGARVVAWAGDLAPPSEDARLATRGNACQERGSNKDGNMPGEYGSFS
PSTLPCDDRRPQISTRSKAVLEQFFRKPISSEVYGTAFVTVSTLEATAIL
RQTVTYQRAFEIIVEEAPLPEDIMWTNIDINFVTSYLRTALGHLLTLAIT
IAFAFPTAFISALNSVETLKRKFPALNDWLPRSDEDNRWINAVLALVAPL
LLLILLSIIPPIFGLLTLRVIKDSRTISEAHYHVFKRYFGFLFYNALVIF
MVTTSVVETVKRAYSNPIEILNQIGITLPKPAAFFINFTIIKALTGLPSE
LMRTMAYLTHLVKIIFVDELTEQNRAQMVIGCRSLTHPGGFHYGKFLAEH
TLLFVYSMCYSCLAPLILPAGFLFFAGAFLVYKRQLLFVYEPEYETDLII
KWYGRLENHVPLSLAVAKDVRFWRGPGKVPSSRTGEILDLGKDTFHHPAV
RAPWCEITQNVPRASGGNSFDIMMLQGRAGIGNIYDRLDKSEATFYERSN
SKTKTFRSMGRRR
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Synonyms
Publications