Naga_100021g31, gene4692 (gene) Nannochloropsis gaditana

Overview
NameNaga_100021g31
Unique Namegene4692
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:515099..521766 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100021g31
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:515099..521766 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL008ngnoL008Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02120NO12G02120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4858rna4858-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4858rna4858Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4858

>rna4858-protein ID=rna4858-protein|Name=rna4858|organism=Nannochloropsis gaditana|type=polypeptide|length=2091bp
MKKDKEACQRRCQKLLIRARLSDALQQELAVTGLVALVEEGSIDLEILLQ
LLVSSKPAFDQSCAVNNERSHGKYSLAIHGGFIPPDGDAAEAVNLPPLAV
ASAVCSGLETLVGCNKGDVGTIIKRLLEVVEGTLRSEVLLRYHHQRGRIQ
SVQSVLVATLANLSLEAMLKESSAGNMDAALLWCEQAPLVSALDFDRKCL
MPLVFAEAIRLPTRPYYPHMEVLLVGIQIPVMVSVLLSTKTWEKEIFLKN
LEGMPLDRLPQPLLVALASSYMELMRFLPGANMRFSEGREVASISHEHRN
NEDGTTGISSPVTDAQVVLRVLKLLFQLVCHLEAPAAIRTLGRGLAHHLV
ESALDVVICGSIFTPLLLPITAMLEALAEFDALDLLGPFLPGLAHLLAAM
GRIGICGRERSRLLIILQTIISASNPATSEDGEQREHFCLAPDALRLCLY
PLLSLTSVTNAAAPLINVIERRLFLKKGSVLSSASGSRWVLSVSMEDHSW
AGTPDSLALLVHSLRTAPEHKAATTWRREWALVRVMGLLFEEDEKGPNGK
NRAEMAVDMLGVLVDQDKKGFLGPRLFPSILYRLNRCGMNTITPSVARFQ
CRLLEFLPSLGLHGVGAQLVQALLQRLASAPGIAEVHRLARSSGSAYKSL
THEALCATSLGTAAISLSAALYRCNMRTLPRLRQLVLAADADMNVGTSSL
RALGNEVDEFRLARVLAILDVVREDPEAGSEFVGLLQTFLMDRQLPGVVS
TAVDCLTYLCSADCLDFNATLRIIRKEGRLNFKQHPSVLISLADFYGAGA
DIFYCSAEKTLSEGDATEATSVPDSVHDDYEERLPRISEEHLLSLHDHLW
DLVQEPHVAVRRQTYLALTGYVPALLACQDDRVPADLRERVYQTLRKEYH
VDSHKGLQELLKVILVAEAEDSGSWRRTLLLTGGAKKYDGGEVTFNKPSG
RSIKALPNANEILQLYKKHRGDIPGLAGATLCAISGKRWNSVGAAEEMGD
LSLPEMIVDVLSDEDLGGRSSIHRILAVHGFLRFFQTFVHEQLCRYPESS
TKTIKAIEEMETSIRTLVKNYGEFSREAANCYLALAALVNALPTQLSYKT
VEVVANLREAAISDMMTGITSDVPSLFVSLGLSARCLGPADGNLVEAIVE
EVYMDHAQKAFTASPNWGWCRWGVLVGSSVATDWVRQISSPDMAALRLLL
TVTKNCLMTLQEEALHSIAVARMLREPLGAFSVALWASQENHATHDIIEW
RAIDVNRDAPSTAKHNLSPSSDAMNRCGDRTAALAGALWGLAILAPNLAH
AGLDGVLLQLYHVLRAAAQKYITLVSPALSVVSVSAVKANLLALSDVLFL
VQNLMSHLTEAGEEESDQGSVGTDNLLDDANILLGVAHLAVSLQGAMAFP
KGVSDDLRRYLSKKMRKLSGVGKEATSGDNIHETYSLSLYLSAFTLLVNG
GPLVDIMGTDLGASLNAERTTANMTTELVGFLRRDVSHSCNHRQSNGAAR
ILGLLAALKEEHDAEENEGKGGRVEGKSMEGLTKGSPSGSSRTMMCRIDP
STFGLPSEGTLLRLVLHDLLRLAVGEDNMESSVANAFIVSSLRGLGSCRT
FKVEHKQMTSALQNLVKSRQLQIKLKQAQCEDAYDSAVVIRACIMFAVKM
APHSGAYVSWLYDFAVNSQDEVLDLVFDVLHSFIGLFPAKLCGQLLERLW
DKSFEKGRKEAFTILHAIKFLDALGRSCKSSDSDMDSARIESVCTFVVTV
ILGFLPSFSSIYLEGELMSECLQDEPNQEPICLNFLQALANVLSALTRCH
PTPEHVKEDLQQALTLKSLSEPGKGAAIVIMIAMLIEEGAMPISDLKSLR
HLVIGPATQSLSYFSEKNRQCLIPWIVRPLWTSSAQDKAAARREWILALL
DYINVEPENPRHMVILVFLLTGNISGKFRIELDIKRVTLLQPQLRAALCR
AENVGQIENEFIAEGWTRLHTIREGIATAFPDTSDADKKLEWGIQVVSRA
VKALHKISCTARREKRLLPEMQQWQYGSCNISSHYVNLYGALLAGIVAGA
THRGEPLLSDQMPPAAKRFIAEWCVIMSAANCERESMKSLA
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Synonyms
Publications