Naga_100090g18, gene459 (gene) Nannochloropsis gaditana

Overview
NameNaga_100090g18
Unique Namegene459
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1192817..1196044 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100090g18
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1192817..1196044 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04690NO02G04690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna476rna476-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna476rna476Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna476

>rna476-protein ID=rna476-protein|Name=rna476|organism=Nannochloropsis gaditana|type=polypeptide|length=1040bp
MKENLKRKKRHDKDKYYHLAKEQGYRSRAAFKLIQINRKYDFLSKAKVCL
DLCAAPGGWCQVAAKHMPSDSIILGVDLLPIRPIAKVKTLVHDITTPECR
AAVKREMRAHPHVDVVLCDGAPNVGATYDKDAFVQNEIALAALRAATCHL
GPGGTFLTKVYRSQDYNALMWVFNQLFASVQAIKPSSSRQQSAEIFVLCL
RYKAPHSIDPKLLDPAYVFAEMEGGSGDKAISIFSAQYARQKRHRSGYDG
EAGVLLHRKASVTAFLASEDPVQFLSEQSEVVFSPGCTPFFEHPLTTEEV
KSCLADLKVLGKSDFKALLKWRLKMKEHQGRASAGTGEEEARAAAAAVLA
ENTRKRSPEEEEEEIQAEIQKLREERAAKTKRERKKEREKSARMRLRQAY
GMHHDAFDLPDHESIFSLKAIGSAAELKRIRDGEFAEVGEGEGEGGPEEE
EEEEEEEEEEEEKEKGDKGEEEEERRRTARLEAELEESYQAYLSNKNEER
LKGTRAGKRKKTVTAALAGEKISEDLATYDGDLRGYLDLLTGRREGDDEE
SDGTGSDTESGEGEEGEPEEGGEEEEEEEEAGPRRDGGGSGHPLLVDPKV
FEGVERNEVKVARWFSNPVLQSVMAGGEEGEEEEEGGERGEDGIGREESG
EEEDASHDEESRATGVGKATGGKGAVRRKDVVEEVLAAMPRTDKQLRHAK
RMKDRERRAHLAEKKTRAADPDGAVDVEEQAMEVVAAPDPEEEEKRRRRR
ALIKAGMGKVLADGESGGEDGKRRVEQGLQSTFEVVPAGGPPLLSLVPPV
ADSRKYDSDHEDWDDEERARTLAIGTMMLRRSKAKELVDASYNRFAWNDA
GDLPEWFVDDEERHYRPQIPIPKPLLDEMKERFKSLASKPIAKVAEARAR
KKHRLVQRLKQAKSKASAIVSNPDMTERDKMKAIQKAVKGKGDKFSRPDK
VYAVVRRGGSSQAKQKDGASGRARVKLVDKRMKKDTRGMKKAMKAKKGRE
VSGEGLEVNILHAQGCSLLSVKCLPGPLFLRFAQLKTKSE
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Synonyms
Publications