Naga_100121g4, gene4354 (gene) Nannochloropsis gaditana

Overview
NameNaga_100121g4
Unique Namegene4354
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:787033..800907 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100121g4
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:787033..800907 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL145ngnoL145Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01250NO06G01250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4512rna4512-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4512rna4512Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4512

>rna4512-protein ID=rna4512-protein|Name=rna4512|organism=Nannochloropsis gaditana|type=polypeptide|length=3928bp
MPVLLQWGETRESEKEEGPTASAPILLEALFKRTLLVKASNRSDDYVEKV
LQGAEGGLRPLRSTVLVVRYFQERHSELRGRDMGDRPWGGGDRETGEADS
QRIVVDVLFSEALRCRLTPAVVLGLACFVSPPLRASSVSPAPNAYRPWQT
TCNIRIGSLQVAFACNGPGGNQRPECLLQLEDLDLKHCQQGPTSHHRSCR
MARLAIGMKNVTMDSTSASRLGTEDVLTLFEAKNMSFSLESSIKQIHQRG
IWNGRKSSLDEEMHQCGKISMPLGVSLSVIPAYWRFGLAISTFLCRNDGN
ALDATIAGLPLVHPPNSFVCMTCECLEVAMKKTAIAPISGSVEDDTPTRD
SRDMLEMVMKEFSVSQKNSHACRAVIDKEKTSGPCIKTFPETTKGSFLIL
QTPVVWVKTITSVQEGRDTEMSVPQQFTFYVSPLNIWALRTAALEITRLM
AALPSSPRIVGASTREKMRLCVDTFTIMIDMPWLAGELPRAVFACRGGEW
VVSNEGRAEALIHNHLGIAHVRVEGHVPPHNAARGSESSFSNRHLEFISN
KLLPFLLPVEEESLKAALQQARHQGSKFEGEEMVVVPLLVPDEDCMVRVA
KKAFVEISWQSERKTRAMVHMEVAFEPCQCILYCPFLYALLRLGTLASKP
MTKSSSLHAGKIEDREERMAKADDEEDVAPPCPTLLLTAQTSRVLLLGGT
LQDARFGVSIDLDNLVLWRRGESGNGRPGEETEVTAPAMPMEIRRLGFGA
QMGQWRVDANQGLELVHAWNLIERVDFEVEGGKGAFIKEDVSRETARTVL
VSPLALTLGTLEMAVLWRVVGVFGRNVTRAPLVQCSGNHAIACREYGNDG
HASTSARLRNADKDVGKELPNLRLACPYLYVSFKSPRHSSRDFCAEMPPT
RTISQAVDMEKVAFHLKLEDCTLSLGTHGGHFDVARLVIENRRATHTGDS
LTHHRGLALLPRPDFLSLFSGTSALTFAWHKPANGNASEMIIQLQPSILY
LDPHSCSTLRSLGGFMNLDLEMLAAKDATEARAVAVAAARRSRGTRLSSF
LLGRTETTKLVTDHLKVVLSSDSRHAGLLPTLEIEADQVLASLRTAGYNV
DHYLNMVQTRISILMTEERKMTNHERCKQATEFQWPLLIGANIFVTQEDM
RRCLRQPLSHLNSLFAAATPLPPSVSIQLEPLQFHFCVPVIDHLQTLVQA
FSSCLVSTTPSYSSTRTVGAVSPGASLPHGATTREQSPFTPGSCCHPLTT
WVALSALEMTAFEGPLPEPEPGALLMRCHPALAPSSSSAPAVDKTHSTYR
PAQHGDTRTLACLTALKWQFPLPVRARSVRCPDHIILQSVKYTPPADFPT
ILELAVVPEGEISESGEMNRCETGNGRESNVVVRWKVRFQAGGDEDGLVA
TAEARSEREVGAKEKHKELHLIECDQGIGGRRWQLNLYWDRTHEHHHQQQ
HEHVLQHLWPPNMLSLECVWRPMVLSLANLISLELFLSPMDQIQSILHVT
IPHAFLQLYPKETRGAEGITVAPGRGEIEDRGELAVVSMRDLDVRYNMKE
QGVKSGLLTVRDLEMDVVDVSRWTLLPALRGNFLTARYSAGNEGSEPTSR
DHTCSSPGLSHDSSPPRYTSTPGLREEDKTGHPVRQSLGISVDWCRINVS
RRIMQSIDVLRQDFKARNASITDTTPPSSAARCYRYKIVNHTQHSLWLGQ
HLTNEIIRAAPCSSQEYTARAWAKVAGRQPSSLLLRFALNMTATSEKEHS
ATTVASTMTTRNEMIAGVDGPSVWSEPVDIDLLGARCLPLRTSGQGHHDV
FLLLDKVLSGTDTRDKPKISRQLQTSPGNREVLMWVVVEKKGLETRVSLH
GGCEIRNYLPVGLDIRICSQNSEGAISPSFFASSGPSASKKRSEAVVNVK
AGPGGLPLAMPPSQEALSLLLDEGFMAPRSRIRGGNNRTSGTRKEPSHNR
TTTDSNTFSTTILGSDGDNIAGGLSGDAMTAPPVDSTYMLQKLMMVQARV
SSRQISTCGSSSSDPCPKSETAFGQTMILTLPEIVQPDQACKVNLTSPHR
HPMTSCTVLGQAPPASPGEPTVWFLCHLRRVILHSQKSISSACPTHSDGR
YIWGWLSLELWPLAYLMNSGLPLDHRVLPGKHPQPVAASPLTPVSRNRAP
IPLHPTPPCESMSSMPAPTPNLEQDMVARDIDDRRRNSNLSMSANDSESG
KVRPSARDVDAAKRAIHDKIQLLSQKRLQKKMGMTREVSAPSSTDGRGDH
QNEDLSIKKEGGLKPSANSAAFSLYEPQNDRVWSPLSPGAPAAIAVCRTD
PRYGLAFSVRPSTSTHGTNGTHKTTDGDDCWIGATCIGAPLISKSQRDFS
MSSSDLLAWVRSGNMGHVDGNAALDECPQPLLNLGLLGPAGEHGSIWNDR
PGCFSGQRLIPYAVRRPAYLGPSLLVDVTPLWTVANHCPFPLSLLALVSR
RPMNTTGASNNVASMTAGFGDFNDAGFQVLPPDGKVVPLNNSAWPFTDWN
KSERSVGPNGSTGMPAFAVGVKIMEDSVTGELKLQDAQLTTAPAQQCWCK
PVGLDALVASMLPVTGKSDEERTGITHGIADISLFVPVQGDKWLPLTLRL
ISRSVRAGGRRESVGIGECHDIKSTGRKEAFSNAHGLGMHRLEIRPRLVL
QNSMRLPARDCVAVYYPDGKFHTAFNNDHGQERSHPKISKADWQIILLRR
SKDAFSPKHDEKSMVQQKGSSLTTMKGGMPDLPLPSSDILDNSTGGIDLL
SSPLSSSTVPYSSLPPRSRMSSTSSPTMLRRVWCRASRRPSGSNEENDSD
DEAGRTEHQVRANKVTDTKHVKNVTYRQTFGLCIVAPGRPLSTAAVLSNF
RPTTFTTPSHPVPGAGTGILDSSDYHYRMLEIEALGEDAREIHLRCPRPG
AGLMGPNGKDIMAIRAHLKYHEGTFYVQISAEPSIPLVVLNRSSLYDIHV
GVERWSIERQKEMRKRRSNVRDSKKEEYGSESGSLLPMQHTLCVPPGARV
EWNPSRPDLYLSAIATPILDGSNPLSDTDVDRQDLDGCTPGITEGAAMKN
DEGASGAAFRRSTFSTKKTPTFDCRLRCALAAGKAGIRTVEREGGEKGEW
EDNITSKVLVSTWSSLLHTGKSCGDGCHRLNMSFWKASGSITGEKSTIQS
NIPKSSAEEEIEGDGEELLRAFWRTSLAAVTATLSTAAGISCLVIDDCLE
HPHKTATDVGNIPGFSSAPRLKVESQRDRLTTLTVGARVLDLQLLEDDVA
IQKLGGYAGTSTRSNGARENVDEAVPPGALHLPALLFIRFSGVETRYDCS
VASGDAFLKGSRTLNVSLDGLQVDHLANGAEFPVVLYFFDKQRQRRDYDE
YAVLDFTFKEVFLNPIVMGEGRPLSYVEMLKISSSRVRVGVDGALLHTIR
FFQENLTATEKGEDSDASAGWDDRLGVPRILSNKVGPAVLTENDQTPCTF
FQSVTFSPLSVLLDARVFVPGSRVFLGLDGSPLFFEGVRLTDVFSTPQAF
LKGILSNYVADAIFRSPALLGSLEIIGSPAILVSRVVSGLKDLVMLSASG
SLTGAGRGLLSLTRHVVGGTLASLAGFSSSVRRNLEPGERVRGGQPHGIH
DAHFHRRSGSVEFSGNGGTRAGKGEEGRRLSLPAGLDVGGSAEGSSKDGG
TSGGSGNLLAGVGRGLYKAVTFPISGAMGVIWWTSDRLITSTGVNRGLEE
GRERLDYGPAGAGASCSVHWDAYYRHSCGLRFRKGTLKAVIHAYMEQKRE
KLYVEITGESEQGGTRGWFGRFIGGGDSARDSSNSGPSSSDNFESGQTTI
LPVRVVLAEEDAIYIIAHSHGAETSVFNLRLSNAGALKWRHVQVEASPSS
LGSIDGITIHRGLAKYEASIIDGKEHGEAWWWHLIEMHVDGGERGVIDHF
SPLKLWLVNEEQVRLLKGFLSRWANGTG
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Synonyms
Publications