Naga_100003g37, gene428 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g37
Unique Namegene428
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1103531..1107541 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g37
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1103531..1107541 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04400NO02G04400Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna444rna444-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna444rna444Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna444

>rna444-protein ID=rna444-protein|Name=rna444|organism=Nannochloropsis gaditana|type=polypeptide|length=1240bp
MQDIWIVGVGILPSKPVPSSSQELQLEAAKMLRSRQRDKLRPYLVLYLFL
IHVLVLLEQQRIQASIVVDEALYSRQLYVLGLPAQQRLAASNILVVGLGG
VGVEITKNVILAGPQSVTLIDPTPARMVDLATQYYLDETSLGQSRAMCSY
AKLKELNPLVQLDLLEPSSMDIEAVAEAIAASGRNFDVIVAADQDKASEE
ALNTLARRLKAKFVAAQAPGLFGSIFCDMGDDFTVNDTDGKEAKTGLLKS
FDPLPMTGETLVTLREGERHDLSKGDLVYFERTATEEDGQTKDAVRAGSA
DPDLETDTFTVKRIVSPSCFTVPASANLVKQVHQYSNGRFRQLKQPLQLG
FQPLTLARQAMRSVPTDFGKASLGRQLTLHACFESLKRFKTHAGGRLPIP
GSATDAAAFKKLVKSCDVLSDVISSHSAAIAARSAAKRPTSKTRAPSPPV
LDEQIMEIFARTCQGSLAPICSFVGGTAAQEVLKACTGTFVPLQQYLFFD
AVEVLTPESGEDESPEAFSASLPSEKECASRGDKYDGMRAVLGSRLMKLL
QDQAIFVVGAGAIGCELLKNLALMGVGPLTVTDNDSIEKSNLNRQFLFRE
RDLGAPKSEAAAQAVQRLNPDVEVRALVRKVGKETEEFFDDNFWFGHDVV
ANALDNVAARKYVDGRCVYYRRPLLESGTEGTSGNVQVVVPFVTESYGSS
VDPPEASIPVCTLKSFPYMIEHCIQWARDFFDGYFRIQPERLNDLTARLS
ESSHRGEEDDAAAAAVLASLRAQTSDETLLRELEGYLVDLEIWDPVPSAR
RCVKWALDRFHELYQSNIEALLREHPRDSVTEDGEPFWSGDRRIPTPIVF
DQSDPLHMDFLLSAALLKARVFNVVDPTTTVEGMSETVQATLDEILASGY
QAPTEVVRAEEEEEGDLEAKVQREFEEVRLTIKRIAKRGGDNGKGTECTA
ARTRPEMFEKDQDWNGHIAFITSASNLRAANYGLARADRLQTKKIAGRII
PAIATTTAVVAGLASLELCKLAQRSLLEEEEEYSDLESQNKEEGLLKQRR
RHRRHYPPLSAYRNAFINLAGPFFALTQPMEAHPIALGEQGEVYNMWDRL
EVTPKKDMTLKSLLAHASENFGLQITSVTLHGSHILYADFMHPGDDNPIL
GKSMTELVEAAMKSENRAIVRKGVEGTNIQGMPLRRHFVDFEIECVDDAG
DEVESPPLRYFFPHVKKRKSKGRRPLAHRWWGGVLKAISK
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Synonyms
Publications