Naga_100025g60, gene4277 (gene) Nannochloropsis gaditana

Overview
NameNaga_100025g60
Unique Namegene4277
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:580182..582412 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100025g60
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:580182..582412 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02340NO06G02340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4433rna4433-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4433rna4433Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4433

>rna4433-protein ID=rna4433-protein|Name=rna4433|organism=Nannochloropsis gaditana|type=polypeptide|length=448bp
MPMGRIQRKTVTHHHLLAAILAIASVGMTQTRAFLMPPPGVAVRKAGTRT
SPNTYAAVMDAPVSIGALVGTQSPRISTQKSTGRRGRRRPTSAPPSSSAS
HPTNDHPRQNEVIHAPDSHASPTEHDILMQGRINAVQRAAVAIQKQRSLS
KTLGRAPTGAEWAQALGGVTEEGLGRLLRQGTVAQAELVKGWEGLVTMFV
GKYAQSLSDSELQDLVVEGQMGVVEAALRFQGGQGATFKTYAFYWVRKRV
MDAAGMYDRSTFAGAHEARQASLIKKAVQSHERETGGKILSTPEIADKVG
IPSAKVEQLARRGKRYGLMERSSGQDGLGRGTSLRFSDTLQDTEDVGGNQ
VRVLDSMYVSEVEEAVRLAVARLPQEERTVLNHRLGLEDGLPKTWEELGQ
VMDGCSVSYMRKVEAKAKTHLRRNVDVVRLVHRRPASFDETFVAAGGV
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Synonyms
Publications