Naga_100078g6, gene4206 (gene) Nannochloropsis gaditana

Overview
NameNaga_100078g6
Unique Namegene4206
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:383421..386837 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100078g6
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:383421..386837 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03290NO06G03290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4362rna4362-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4362rna4362Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4362

>rna4362-protein ID=rna4362-protein|Name=rna4362|organism=Nannochloropsis gaditana|type=polypeptide|length=959bp
MEPAFRDVGHMPGLELWRIQDLTPVKQTIINGHFHKGNAYILLSTFKKTG
DTTFEHAIHIWWGSEASQNEVAAAARKTVELDDAVGGAQVHYREIGGHES
ALFLSYFKDFGGLRYLAGADGFAPVERDGMLSRLLHVEGLGVVRATEVPT
QRSSLNAGGCFLLDTGLKLFLWNGPGANCFEKAKALELAMRIKDAERGGR
AEILAVNELDKEDEGTCASFWDALGGDRAPLTVSSGSHASNEAREVVLAR
ITSGPTGDLTVTPISATHKGLKRSMLASEAVFVLDAGASHCVWAWVGKAA
TETEKREGLALAVSFVEKTHRSAMEVPVVRVMEGSETAAFISHFAEWDAP
YALKFDAIARYTGEGGGTDGAPSQEGEEQDETRTTLAERLRQEERPLTEE
GDRPGTLRIWRIEKTHKVEVPLEEHGLFEGGSSYLVLHSCSRGDTETEAH
SLYLWQGAASKVDAEEAWALLGEETEEDGGSRSVGVRVLQGHEPAHFRRL
FQGRLVLFAGGVGGGCGHGKKRESDASLGAARIPALFRAKGLAPEDSCAV
EVPVTAQSLNSENCFILSEPGDSLLFVWWGTGATPAERDAAMHLGDVLYR
WQEQQEPGRGAGEGAVEMVAVEEGEEPDEFWTSMGGLATYPKRQAGEAQV
PREPRLFALGDATGSSRMEEMAGFVQADLDGSKFCLLDTYRHVFVWVGDQ
AQEKERKEAWKMGQDYLDQAMDGRDPGTPLVRVSAGCEPSLFTQHFADWD
VTRAATLARGDAYEERLARVLAERVEAHGAVEAVAAVVEDWENEIDKNVV
ESVDKPVAAATAMLVPDEASEASPYDMDRPTSLTAPTAVVLEGASHNSET
QCQADKAAPCQFSSLSSATTTHASVAPGPPPPALPVSSNPPASLPPSTPS
AATVTIVPTPQEAAGDPTRREAMLSDEEFAATFKGRSKVEFYALPKWKQV
ALKKQAGLF
back to top
Synonyms
Publications