Naga_100241g5, gene4095 (gene) Nannochloropsis gaditana

Overview
NameNaga_100241g5
Unique Namegene4095
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:88417..93999 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100241g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:88417..93999 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL147ngnoL147Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL144ngnoL144Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G04510NO06G04510Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4253rna4253-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4253rna4253Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4253

>rna4253-protein ID=rna4253-protein|Name=rna4253|organism=Nannochloropsis gaditana|type=polypeptide|length=817bp
MMSYIGSRAQTSRRLLGCQVWKNCPESVLTQRQQQHMHLARVFSAFARRN
KLHPLPLETLLSTLPRPPSSFLPEIQEHLRQSTRGGRRRKLVVVDDDPTG
TQSVQGFPVLSEWTAEALAREIEDDSTPGFFLLSNIRALSARDAEHVLRE
IRTGLDAALKINDVHYMTTSPASVLPVHLTPFAQDKAFGFSTSNLKDWKL
GGGVKAEDVASITLDDIRRGGPTGVRDKLLSLARSNTTSLGTYVVVNAVT
REDLECVVLGSLQAEDAGLEGSTEGEPGIRMVYRTAADWVAVRAGLSPLP
PLPASALRPPPDLPSHVPSAEGGLIVVGSYVPKSSEQLCFLLENGGKEQF
QGIEICVDTLFQDETARLGEMERVTAAIEEGINAGKHVVIFTSRQLRQED
GAGGLISGMKVSDSVVEIVKNLRTRPLFLIAKGGITSNDVAVKGLGLKRA
MVLGPILPGVPVWECGEESKFPGMKYVVFPGNVGSSQALFEAAQKLCFPP
STSTPPSSDSKTSLASCVTPTRPVFASSSRTLDLLEAARAKGEAVGAFNV
YNLEGVRAVVRAAAATNSSAILQVHPSSLEFGGQPLLELCRAGRFFVEEM
GTMRGSKEKDTIAVHLDHANEAAVIEQVLATQLVDSVMCDGSAKPYEENV
SWTAQMTRLAHSKGIPVEAELGRLAGEEDGLSVQEKEAKMTDPLQVPDFV
EQTDIDMVAVTIGNVHGRYATNPPVLDLARLADIRAATDRLLVLHGASGL
PPKVVHATIAIGAICKFNVNTEVREAAMQVIREGKAKDVLPLMQTTGEAM
QRVIENKMRLFKASPSI
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Synonyms
Publications