Naga_100003g69, gene399 (gene) Nannochloropsis gaditana

Overview
NameNaga_100003g69
Unique Namegene399
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1028921..1033999 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100003g69
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1028921..1033999 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G04090NO02G04090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna415rna415-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna415rna415Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna415

>rna415-protein ID=rna415-protein|Name=rna415|organism=Nannochloropsis gaditana|type=polypeptide|length=1338bp
MASNGTKRLKTDTDVLHFFRAPGYAEPNIKKLNFKIKAALPEVEAVETEF
CFNVQLSSTSNPLTEQEQERLLWILRETFEPTHTRPGGSFLTEVLAAGRE
GLVGQIFEVGPRLTFSTAYSSNAVSVCVACGLTGINRLERSRRYLVWTKT
ALTDAQASAFLAQVHDRMTEMPYPEPLQTFETGLTPKPTQVVPILEEGRS
ALETLNGTLGLGFDDWDLDYYTNLFTNRLQRNPTDVECFDMGQSNSEHSR
HWFFGGKIIIDGVEQADTLFKMVKDTLPKDRPNNSVIAFFDNSRAIRGYP
ITTLKPEKPGHPSKMVPYSNTFHPTLTAETHNFPTGVAPFPGAETGTGGR
LRDVQACGRGNATVAGMSAYCVGNLRIPGYTLPWEDPSFKYPGSMASPLN
IEIEASNGASDYGNKYGEPVVSGYTRSFGQRLPNGDRYEFIKPIMFSAGL
GNLNALHARKEEPKAGMVVVKIGGPAYRIGMGGGAASSRASGEADAELDF
NAVQRGDAEMENKLNRVLRSCIELAERNPIVSIHDQGAGGNGNVLKEIVE
PLGASYDLRKIPLGDPTLSALEIWGAEYQENDCFLTTKEDLPMVLAFAKR
ENCTIAAVGEVTEDGRVVVEDSKTGTTVVDLPLDLVLGKMPQKEFPMIRV
PMPLRPLALPDGLTAEAALDRVLRLLAVGCKRFLTNKVDRSVTGLVAQQQ
CVGPLHIPLANVAVLAQSHLSTTGAAITCGEQPIKGLIDPAAMARMTVAE
TITNIMWAKLSSLTDIKVAGNWMWAAKFEGEGPKMYDCCKALRDILIAMG
VGIDGGKDSLSMAARVESEVVKSPGNLTVPAYCTVSDITKTVTPDLKRPD
ESSLVFVELDASKARLGGTALAQVYNQLGDQSPDVEDPAKLVSLFTVTQQ
LIEDRALLAGHDRSDGGLITVLLEMAFAGNCGIDVDLTLPAGVEHTALAT
LFNEEVGIVLEVPTAAADGVAAAYAAQGLASSVIGKSTSEKKCVVRVDGE
TVVDASMPVLRDVWEATGFELEKLQCNPECAIQEHEGLASRTGPTWHLTY
SPAPTPVALMEASNKPKVAVIRQEGSNGDREMISAFHAAGFEVFDVHVND
LLAETVALDAFQGIVFVGGFSYADVLDSAKGWAAVLKYNPSVLAQLEAFK
ARPDTFSLGVCNGCQLMALLGWVPYPDHNVAEAAQPRFIENNSARFESRF
SSVQIQPSAAIMFAGMAGSSLGVWVAHGEGRVHFSTHETQDFVVAKQLAP
MKYVDDDNNPTEVYPFNPNGSPLGIAALCSEDGRHLAMMPHPERCYLGWQ
WPYLPREWEEKGMRSGVGPWLRMFQNARTWCETHKTTN
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Synonyms
Publications